About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36466ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides36467ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36468FRIZZLED
Paelopatides36469-
Paelopatides36470CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36471CONTACTIN 5
Paelopatides36472PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
Paelopatides36473PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
Paelopatides36474ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides36475MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25
Paelopatides36476
Paelopatides36477
Paelopatides36478POL PROTEIN
Paelopatides36479ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides36480PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides36481
Paelopatides36482
Paelopatides36483G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP
Paelopatides36484
Paelopatides36485
Paelopatides36486TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA
Paelopatides36487CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Paelopatides36488
Paelopatides36489SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN
Paelopatides36490
Paelopatides36491TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides36492
Paelopatides36493G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides36494
Paelopatides36495
Paelopatides36496GLYCOSYLATED LYSOSOMAL MEMBRANE PROTEIN
Paelopatides36497GLUTAREDOXIN 2
Paelopatides36498MEVALONATE KINASE/GALACTOKINASE
Paelopatides36499ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36500MEVALONATE KINASE/GALACTOKINASE
Paelopatides36501MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S30/P52 PRO-APOTOTIC PROTEIN
Paelopatides36502AGAP008221-PA
Paelopatides36503
Paelopatides36504RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Paelopatides36505G-PROTEIN COUPLED RECEPTOR
Paelopatides36506DEATH-ASSOCIATED PROTEIN 1
Paelopatides36507EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN
Paelopatides36508
Paelopatides36509
Paelopatides36510
Paelopatides36511LRP2-BINDING PROTEIN
Paelopatides36512PROTEASOME MATURATION PROTEIN UMP1
Paelopatides36513BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II
Paelopatides36514CUBILIN-LIKE PROTEIN
Paelopatides36515F5/8 TYPE C DOMAIN-CONTAINING PROTEIN
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