The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides36516 | |
| Paelopatides36517 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| Paelopatides36518 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| Paelopatides36519 | |
| Paelopatides36520 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36521 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36522 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides36523 | |
| Paelopatides36524 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D |
| Paelopatides36525 | REVERSE TRANSCRIPTASE |
| Paelopatides36526 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides36527 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides36528 | CYTOCHROME P450 FAMILY 3 |
| Paelopatides36529 | F-BOX ONLY PROTEIN 4 |
| Paelopatides36530 | PROTEIN CBG26694 |
| Paelopatides36531 | EXPRESSED PROTEIN |
| Paelopatides36533 | - |
| Paelopatides36534 | CENTROMERE PROTEIN X |
| Paelopatides36535 | |
| Paelopatides36536 | FI04643P-RELATED |
| Paelopatides36537 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides36538 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36539 | EXPRESSED PROTEIN |
| Paelopatides36540 | UBIQUITIN-PROTEIN LIGASE E3C |
| Paelopatides36541 | |
| Paelopatides36542 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36543 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides36544 | POL PROTEIN |
| Paelopatides36545 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36546 | |
| Paelopatides36547 | |
| Paelopatides36548 | INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 |
| Paelopatides36549 | INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 |
| Paelopatides36550 | RH14732P |
| Paelopatides36551 | |
| Paelopatides36552 | PROTEIN CBG26694 |
| Paelopatides36553 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36554 | |
| Paelopatides36555 | CYTOCHROME P450 508A4-RELATED |
| Paelopatides36556 | CYTOCHROME P450 508A4-RELATED |
| Paelopatides36557 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36558 | |
| Paelopatides36559 | NXPE FAMILY MEMBER |
| Paelopatides36560 | |
| Paelopatides36561 | |
| Paelopatides36562 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36563 | |
| Paelopatides36564 | |
| Paelopatides36565 | |
| Paelopatides36566 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
