The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides36821 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides36822 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| Paelopatides36823 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| Paelopatides36824 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| Paelopatides36825 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| Paelopatides36826 | - |
| Paelopatides36827 | SER/THR PROTEIN KINASE-TRB |
| Paelopatides36828 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36829 | |
| Paelopatides36830 | |
| Paelopatides36831 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36832 | PROTEIN CBG26694 |
| Paelopatides36833 | |
| Paelopatides36834 | TRINUCLEOTIDE REPEAT-CONTAINING GENE 6 |
| Paelopatides36835 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides36836 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| Paelopatides36837 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| Paelopatides36838 | SI:CH211-196P9.1-RELATED |
| Paelopatides36839 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36840 | |
| Paelopatides36841 | ARYLACETAMIDE DEACETYLASE |
| Paelopatides36842 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
| Paelopatides36843 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8 |
| Paelopatides36844 | RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F |
| Paelopatides36845 | |
| Paelopatides36846 | |
| Paelopatides36847 | MUSCLEBLIND-LIKE PROTEIN |
| Paelopatides36848 | |
| Paelopatides36849 | HELICASE RELATED |
| Paelopatides36850 | LP10445P |
| Paelopatides36851 | FRUCTOSE-2,6-BISPHOSPHATASE TIGAR |
| Paelopatides36852 | |
| Paelopatides36853 | |
| Paelopatides36854 | |
| Paelopatides36855 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| Paelopatides36856 | |
| Paelopatides36857 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides36858 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides36859 | U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11 |
| Paelopatides36860 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| Paelopatides36861 | PROTEIN FOLDING REGULATOR |
| Paelopatides36862 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| Paelopatides36863 | IDURONATE 2-SULFATASE |
| Paelopatides36864 | IDURONATE 2-SULFATASE |
| Paelopatides36865 | DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2 |
| Paelopatides36866 | |
| Paelopatides36867 | |
| Paelopatides36868 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides36869 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides36870 | DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2 |
