The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides36771 | AUTOPHAGY PROTEIN 12 |
Paelopatides36772 | WD-40 REPEAT PROTEIN |
Paelopatides36773 | |
Paelopatides36774 | |
Paelopatides36775 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36776 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36777 | |
Paelopatides36778 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides36779 | BETA-LACTAMASE-RELATED |
Paelopatides36780 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36781 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36782 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36783 | UNCHARACTERIZED |
Paelopatides36784 | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER |
Paelopatides36785 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides36786 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36787 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36788 | |
Paelopatides36789 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36790 | |
Paelopatides36791 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides36792 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides36793 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36794 | |
Paelopatides36795 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides36796 | PROTEIN CBG26694 |
Paelopatides36797 | I[[H]] CHANNEL, ISOFORM E |
Paelopatides36798 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36799 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36800 | - |
Paelopatides36801 | |
Paelopatides36802 | |
Paelopatides36803 | - |
Paelopatides36804 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36805 | N-TERMINAL ACETYLTRANSFERASE-RELATED |
Paelopatides36806 | N-TERMINAL ACETYLTRANSFERASE-RELATED |
Paelopatides36807 | |
Paelopatides36808 | |
Paelopatides36809 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
Paelopatides36810 | |
Paelopatides36811 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36812 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36813 | PLEXIN |
Paelopatides36814 | PLEXIN |
Paelopatides36815 | |
Paelopatides36816 | OVOCHYMASE-RELATED |
Paelopatides36817 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides36818 | |
Paelopatides36819 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Paelopatides36820 |