The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides37078 | REVERSE TRANSCRIPTASE |
Paelopatides37079 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides37080 | PRENYLTRANSFERASES |
Paelopatides37081 | TRANSPOSON |
Paelopatides37082 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
Paelopatides37083 | |
Paelopatides37084 | MITOCHONDRIAL DIVISION PROTEIN 1-RELATED |
Paelopatides37085 | TRANSDUCIN BETA-LIKE 3 |
Paelopatides37086 | CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN |
Paelopatides37087 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides37088 | |
Paelopatides37089 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides37095 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides37096 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
Paelopatides37097 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
Paelopatides37098 | UNCHARACTERIZED |
Paelopatides37099 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides37100 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides37101 | |
Paelopatides37102 | |
Paelopatides37103 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides37104 | BEN DOMAIN-CONTAINING PROTEIN 6 |
Paelopatides37105 | DNA2/NAM7 HELICASE FAMILY |
Paelopatides37106 | |
Paelopatides37107 | JOSEPHIN 1, 2 |
Paelopatides37108 | SOLUTE CARRIER FAMILY 17 |
Paelopatides37109 | RAN BINDING PROTEIN |
Paelopatides37110 | |
Paelopatides37111 | |
Paelopatides37112 | |
Paelopatides37113 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
Paelopatides37114 | RETROTRANSPOSON |
Paelopatides37115 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides37116 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides37117 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides37118 | |
Paelopatides37119 | UNCHARACTERIZED |
Paelopatides37120 | |
Paelopatides37123 | |
Paelopatides37124 | BEN DOMAIN-CONTAINING PROTEIN 6 |
Paelopatides37125 | ENDONUCLEASE-RELATED |
Paelopatides37126 | PROTEIN CBG26694 |
Paelopatides37127 | PROTEIN CBG26694 |
Paelopatides37128 | |
Paelopatides37129 | YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP |
Paelopatides37130 | |
Paelopatides37131 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Paelopatides37133 | SOLUTE CARRIER FAMILY 17 |
Paelopatides37134 | |
Paelopatides37135 | COILIN |