The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides37186 | VHS DOMAIN CONTAINING PROTEIN FAMILY |
Paelopatides37187 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
Paelopatides37188 | ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR |
Paelopatides37189 | |
Paelopatides37190 | VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 |
Paelopatides37191 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 |
Paelopatides37192 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Paelopatides37194 | RETROTRANSPOSON |
Paelopatides37195 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Paelopatides37196 | SPHINGOSINE KINASE |
Paelopatides37197 | FAS-BINDING FACTOR 1 |
Paelopatides37198 | FAS-BINDING FACTOR 1 |
Paelopatides37199 | |
Paelopatides37200 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37203 | UNCHARACTERIZED |
Paelopatides37204 | UNCHARACTERIZED |
Paelopatides37205 | PLEXUS, ISOFORM A |
Paelopatides37206 | |
Paelopatides37207 | GENETIC SUPPRESSOR ELEMENT 1 |
Paelopatides37208 | ENDONUCLEASE-RELATED |
Paelopatides37209 | POL PROTEIN |
Paelopatides37210 | |
Paelopatides37211 | GENETIC SUPPRESSOR ELEMENT 1 |
Paelopatides37212 | DNA REPLICATION COMPLEX GINS PROTEIN PSF2 |
Paelopatides37213 | DREV PROTEIN |
Paelopatides37214 | 60S RIBOSOMAL PROTEIN L14 |
Paelopatides37215 | D-LACTATE DEHYDROGENASE |
Paelopatides37216 | NUCLEAR HORMONE RECEPTOR |
Paelopatides37217 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Paelopatides37218 | DDB1- AND CUL4-ASSOCIATED FACTOR 11 |
Paelopatides37219 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
Paelopatides37220 | G-PROTEIN COUPLED RECEPTOR |
Paelopatides37221 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
Paelopatides37222 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides37223 | CYTOKINE RECEPTOR |
Paelopatides37224 | PROTEIN SIDEKICK |
Paelopatides37225 | ASPARTATE AMINOTRANSFERASE |
Paelopatides37226 | BUCENTAUR RELATED |
Paelopatides37227 | PROTEIN CBG26694 |
Paelopatides37228 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides37229 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides37230 | MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN |
Paelopatides37231 | PROTEIN CBG26694 |
Paelopatides37232 | PARANEOPLASTIC ANTIGEN |
Paelopatides37233 | PROTEIN CBG26694 |
Paelopatides37234 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
Paelopatides37235 | |
Paelopatides37236 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides37237 | SI:CH211-266K2.1 |
Paelopatides37238 | URIDINE KINASE |