The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides37296 | |
| Paelopatides37297 | NEUROPEPTIDE Y RECEPTOR |
| Paelopatides37298 | PROTEIN CBG16327 |
| Paelopatides37299 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides37300 | GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A, 7 |
| Paelopatides37301 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| Paelopatides37302 | |
| Paelopatides37303 | |
| Paelopatides37304 | 30S/40S RIBOSOMAL PROTEIN S4 |
| Paelopatides37305 | SYNAPSE-ASSOCIATED PROTEIN |
| Paelopatides37306 | |
| Paelopatides37307 | HEADCASE PROTEIN |
| Paelopatides37308 | REVERSE TRANSCRIPTASE |
| Paelopatides37309 | |
| Paelopatides37310 | |
| Paelopatides37311 | |
| Paelopatides37312 | |
| Paelopatides37313 | |
| Paelopatides37314 | 60S RIBOSOMAL PROTEIN L36A/L44 |
| Paelopatides37315 | FOLLISTATIN-RELATED |
| Paelopatides37316 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| Paelopatides37317 | SERINE/THREONINE-PROTEIN KINASE |
| Paelopatides37318 | ADP RIBOSYLATION FACTOR-RELATED |
| Paelopatides37319 | UBIQUITIN-CONJUGATING ENZYME E2 |
| Paelopatides37320 | NUCLEAR-INTERACTING PARTNER OF ALK |
| Paelopatides37321 | |
| Paelopatides37322 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
| Paelopatides37323 | |
| Paelopatides37324 | AGAP008228-PA |
| Paelopatides37325 | SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN |
| Paelopatides37326 | |
| Paelopatides37327 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides37328 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides37333 | |
| Paelopatides37334 | |
| Paelopatides37335 | CYCLINS |
| Paelopatides37336 | CYTOCHROME B561-RELATED |
| Paelopatides37337 | CYTOCHROME B561-RELATED |
| Paelopatides37338 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides37339 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides37341 | PROTEIN CBG23806 |
| Paelopatides37342 | |
| Paelopatides37343 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides37344 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37345 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| Paelopatides37346 | CYTOCHROME P450 FAMILY 4 |
| Paelopatides37347 | CYTOCHROME P450 FAMILY 4 |
| Paelopatides37348 | CYTOCHROME P450 FAMILY 4 |
| Paelopatides37349 | LD02310P |
| Paelopatides37350 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
