The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides37239 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
Paelopatides37240 | |
Paelopatides37241 | KINESIN-LIKE PROTEIN KIF11 |
Paelopatides37242 | XAA-PRO AMINOPEPTIDASE 1 |
Paelopatides37243 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Paelopatides37244 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Paelopatides37245 | CENTROMERE PROTEIN E |
Paelopatides37246 | TRANSPOSON |
Paelopatides37247 | |
Paelopatides37250 | ACROSIN-RELATED |
Paelopatides37251 | MATRIX METALLOPROTEINASE |
Paelopatides37252 | PROTEIN CBG10425 |
Paelopatides37253 | |
Paelopatides37254 | |
Paelopatides37255 | |
Paelopatides37256 | |
Paelopatides37257 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
Paelopatides37258 | |
Paelopatides37259 | |
Paelopatides37260 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 2 |
Paelopatides37262 | TYROSINE-PROTEIN KINASE |
Paelopatides37263 | |
Paelopatides37264 | |
Paelopatides37265 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37266 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37267 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37268 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
Paelopatides37270 | UNCHARACTERIZED |
Paelopatides37271 | REVERSE TRANSCRIPTASES |
Paelopatides37272 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 |
Paelopatides37273 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides37274 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides37275 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
Paelopatides37276 | |
Paelopatides37280 | MULTICOPPER OXIDASE-RELATED |
Paelopatides37281 | PKSB |
Paelopatides37282 | G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN |
Paelopatides37283 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37284 | |
Paelopatides37285 | FI04643P-RELATED |
Paelopatides37286 | PKSB |
Paelopatides37287 | PROTEIN CBG26694 |
Paelopatides37288 | ASPARTATE AMINOTRANSFERASE |
Paelopatides37289 | PROTEIN C8ORF37 |
Paelopatides37290 | BUCENTAUR RELATED |
Paelopatides37291 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides37292 | |
Paelopatides37293 | ANNEXIN |
Paelopatides37294 | PROTEIN CBG26694 |
Paelopatides37295 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |