About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides37557SAM DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37558SAM DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides37559MRNA EXPORT FACTOR AND BUB3
Paelopatides37560IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Paelopatides37561MUCIN 4-RELATED
Paelopatides37562HISTONE H4 TRANSCRIPTION FACTOR-RELATED
Paelopatides37563REVERSE TRANSCRIPTASES
Paelopatides37564BUCENTAUR RELATED
Paelopatides37565
Paelopatides37566PARANEOPLASTIC ANTIGEN
Paelopatides37567
Paelopatides37568
Paelopatides37569PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides37570RETROTRANSPOSON
Paelopatides37571ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides37572SCAVENGER RECEPTOR CLASS F
Paelopatides37573ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides37574-
Paelopatides37575
Paelopatides37576
Paelopatides37577REVERSE TRANSCRIPTASES
Paelopatides37578PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides37579
Paelopatides37580SORTING NEXIN 17 AND 27
Paelopatides37581-
Paelopatides37582
Paelopatides37583
Paelopatides37584NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 6
Paelopatides37585F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
Paelopatides37586ATP-DEPENDENT DNA HELICASE
Paelopatides37587OSMOSIS RESPONSIVE FACTOR
Paelopatides37588DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX
Paelopatides37589RNA 3' TERMINAL PHOSPHATE CYCLASE
Paelopatides37590SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides37591SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides37592ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides37593ENDONUCLEASE-RELATED
Paelopatides37594POL PROTEIN
Paelopatides37595
Paelopatides37596CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides37597
Paelopatides37600PROTEIN CBG26694
Paelopatides37601PROTEIN CBG26694
Paelopatides37602PROTEIN, PUTATIVE-RELATED
Paelopatides37603PROTEIN CBG26694
Paelopatides37604RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides37605ALPHA-AMYLASE
Paelopatides376061-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
Paelopatides37607
Paelopatides37608ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATED
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