The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides37507 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides37508 | |
Paelopatides37509 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides37510 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides37511 | INTIMAL THICKNESS RECEPTOR-RELATED |
Paelopatides37512 | |
Paelopatides37513 | |
Paelopatides37514 | - |
Paelopatides37515 | |
Paelopatides37516 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides37517 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides37518 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
Paelopatides37519 | |
Paelopatides37520 | PROTEIN CBG26694 |
Paelopatides37521 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
Paelopatides37522 | |
Paelopatides37523 | |
Paelopatides37524 | SPERM-SPECIFIC FAMILY, CLASS Q |
Paelopatides37525 | LORICRIN |
Paelopatides37526 | |
Paelopatides37527 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides37528 | |
Paelopatides37529 | |
Paelopatides37530 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides37531 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides37532 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Paelopatides37533 | - |
Paelopatides37534 | |
Paelopatides37535 | DED DOMAIN-CONTAINING PROTEIN |
Paelopatides37536 | YIPPEE DOMAIN-CONTAINING PROTEIN |
Paelopatides37537 | |
Paelopatides37538 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides37539 | |
Paelopatides37540 | MYB-BINDING PROTEIN 1A FAMILY MEMBER |
Paelopatides37541 | BUCENTAUR RELATED |
Paelopatides37542 | MYB-BINDING PROTEIN 1A FAMILY MEMBER |
Paelopatides37543 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
Paelopatides37544 | |
Paelopatides37545 | |
Paelopatides37546 | |
Paelopatides37547 | A-KINASE ANCHOR PROTEINS |
Paelopatides37548 | |
Paelopatides37549 | |
Paelopatides37550 | |
Paelopatides37551 | PHOSPHOLIPASE B-RELATED |
Paelopatides37552 | PHOSPHOLIPASE B-RELATED |
Paelopatides37553 | PHOSPHOSERINE PHOSPHATASE |
Paelopatides37554 | GTPASE ERA |
Paelopatides37555 | SPLICING FACTOR 3B SUBUNIT 5 |
Paelopatides37556 | STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 |