The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides37762 | SERINE INCORPORATOR |
| Paelopatides37763 | TRANSPOSON |
| Paelopatides37764 | TRANSPOSON |
| Paelopatides37765 | TRANSPOSON |
| Paelopatides37766 | |
| Paelopatides37767 | |
| Paelopatides37768 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides37769 | |
| Paelopatides37770 | |
| Paelopatides37771 | FAM11A, B PROTEIN |
| Paelopatides37773 | RING FINGER PROTEIN 37 |
| Paelopatides37774 | SLIT HOMOLOG |
| Paelopatides37775 | CRUMBS FAMILY MEMBER |
| Paelopatides37776 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides37777 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides37778 | |
| Paelopatides37779 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37780 | ZGC:195170 |
| Paelopatides37781 | ORGANIC ANION TRANSPORTER |
| Paelopatides37782 | |
| Paelopatides37783 | NETRIN RECEPTOR UNC5 |
| Paelopatides37784 | ZGC:195170 |
| Paelopatides37785 | |
| Paelopatides37786 | |
| Paelopatides37787 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
| Paelopatides37788 | |
| Paelopatides37789 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides37790 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides37791 | |
| Paelopatides37792 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37793 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides37794 | |
| Paelopatides37795 | HEDGEHOG |
| Paelopatides37796 | |
| Paelopatides37797 | |
| Paelopatides37798 | POL PROTEIN |
| Paelopatides37799 | |
| Paelopatides37800 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides37801 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides37802 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37803 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37804 | |
| Paelopatides37805 | PROTEIN CBG26694 |
| Paelopatides37806 | GTP-BINDING |
| Paelopatides37807 | GTP-BINDING |
| Paelopatides37808 | |
| Paelopatides37809 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37810 | TESTIS-EXPRESSED PROTEIN 52 |
| Paelopatides37811 | SIALIDASE |
| Paelopatides37812 | SODIUM/NUCLEOSIDE COTRANSPORTER |
