The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides38031 | PROTEIN CBG26694 |
Paelopatides38032 | CATION-TRANSPORTING ATPASE-RELATED |
Paelopatides38033 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides38034 | |
Paelopatides38035 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides38036 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides38037 | |
Paelopatides38038 | COILED-COIL DOMAIN-CONTAINING PROTEIN 57 |
Paelopatides38039 | LATE ENDOSOMAL/LYSOSOMAL MP1 INTERACTING PROTEIN |
Paelopatides38040 | SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 |
Paelopatides38041 | |
Paelopatides38042 | SEPTIN |
Paelopatides38043 | |
Paelopatides38044 | PEPTIDE CHAIN RELEASE FACTOR |
Paelopatides38045 | XYLOSYLTRANSFERASE OXT |
Paelopatides38046 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 70 |
Paelopatides38047 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 70 |
Paelopatides38048 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38049 | L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
Paelopatides38050 | BONUS, ISOFORM C-RELATED |
Paelopatides38051 | PROTEIN CBG26694 |
Paelopatides38052 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
Paelopatides38053 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
Paelopatides38054 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
Paelopatides38055 | |
Paelopatides38056 | |
Paelopatides38057 | TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 |
Paelopatides38058 | |
Paelopatides38059 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38060 | BEN DOMAIN-CONTAINING PROTEIN 5 |
Paelopatides38061 | USE1-LIKE PROTEIN |
Paelopatides38062 | GLYCOSIDASE FAMILY 31 |
Paelopatides38063 | PARANEOPLASTIC ANTIGEN |
Paelopatides38064 | |
Paelopatides38065 | G-PROTEIN COUPLED RECEPTOR |
Paelopatides38066 | |
Paelopatides38067 | F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA |
Paelopatides38068 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
Paelopatides38069 | SARCOMA ANTIGEN NY-SAR-95-RELATED |
Paelopatides38070 | SARCOMA ANTIGEN NY-SAR-95-RELATED |
Paelopatides38071 | |
Paelopatides38072 | HISTONE DEACETYLASE HDAC1-RELATED |
Paelopatides38074 | PROTEIN CBG26694 |
Paelopatides38075 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides38076 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38077 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides38078 | UBIQUITIN-CONJUGATING ENZYME E2 |
Paelopatides38079 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Paelopatides38080 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides38081 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |