The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides38184 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38185 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38186 | ALPHA-2,8-SIALYLTRANSFERASE |
Paelopatides38187 | |
Paelopatides38188 | |
Paelopatides38189 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Paelopatides38190 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides38191 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38192 | |
Paelopatides38193 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides38194 | DNA HELICASE RECQ FAMILY MEMBER |
Paelopatides38195 | |
Paelopatides38196 | SI:CH211-243P7.3-RELATED |
Paelopatides38197 | |
Paelopatides38198 | |
Paelopatides38199 | |
Paelopatides38200 | |
Paelopatides38201 | BATTENIN |
Paelopatides38202 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides38203 | |
Paelopatides38204 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38205 | COILED-COIL DOMAIN-CONTAINING PROTEIN 15 |
Paelopatides38206 | ETS |
Paelopatides38207 | |
Paelopatides38208 | |
Paelopatides38209 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides38210 | TRANSMEMBRANE PROTEIN 136 |
Paelopatides38211 | POL PROTEIN |
Paelopatides38212 | NETRIN RECEPTOR UNC5 |
Paelopatides38213 | ADENOSINE KINASE |
Paelopatides38214 | FTP DOMAIN-CONTAINING PROTEIN |
Paelopatides38215 | PROTEIN CBG26694 |
Paelopatides38216 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides38217 | UNCHARACTERIZED |
Paelopatides38218 | AGAP009604-PA |
Paelopatides38219 | ZINC FINGER PROTEIN |
Paelopatides38220 | GTP-BINDING |
Paelopatides38221 | |
Paelopatides38222 | |
Paelopatides38223 | SI:CH211-196P9.1-RELATED |
Paelopatides38224 | CYTOCHROME C OXIDASE POLYPEPTIDE VIA |
Paelopatides38225 | RIBOSOMAL PROTEIN S6 KINASE |
Paelopatides38226 | ENDONUCLEASE-RELATED |
Paelopatides38227 | ASPARTYL PROTEASE DDI-RELATED |
Paelopatides38228 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38229 | INOSITOL 5-PHOSPHATASE |
Paelopatides38230 | METABOTROPIC GLUTAMATE RECEPTOR |
Paelopatides38231 | |
Paelopatides38232 | PRE-MRNA-PROCESSING FACTOR 19 |
Paelopatides38233 | - |