The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides38234 | - |
| Paelopatides38235 | PRE-MRNA-PROCESSING FACTOR 19 |
| Paelopatides38236 | PEPTIDASE |
| Paelopatides38237 | |
| Paelopatides38238 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides38239 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides38240 | |
| Paelopatides38241 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| Paelopatides38242 | ACETYLCHOLINESTERASE |
| Paelopatides38243 | EXPRESSED PROTEIN |
| Paelopatides38244 | |
| Paelopatides38245 | |
| Paelopatides38246 | REVERSE TRANSCRIPTASE |
| Paelopatides38247 | CYCLINS |
| Paelopatides38248 | |
| Paelopatides38249 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38250 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38251 | |
| Paelopatides38252 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38253 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides38254 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides38255 | 2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATED |
| Paelopatides38256 | |
| Paelopatides38257 | FRG1 PROTEIN |
| Paelopatides38258 | CARBOHYDRATE SULFOTRANSFERASE |
| Paelopatides38259 | COILED-COIL DOMAIN-CONTAINING PROTEIN 169 |
| Paelopatides38260 | |
| Paelopatides38261 | RWD DOMAIN CONTAINING PROTEIN 2 |
| Paelopatides38262 | |
| Paelopatides38263 | |
| Paelopatides38264 | UNCHARACTERIZED |
| Paelopatides38265 | |
| Paelopatides38266 | UNCHARACTERIZED |
| Paelopatides38268 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| Paelopatides38269 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| Paelopatides38270 | |
| Paelopatides38271 | |
| Paelopatides38272 | REVERSE TRANSCRIPTASES |
| Paelopatides38273 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
| Paelopatides38274 | |
| Paelopatides38276 | |
| Paelopatides38277 | |
| Paelopatides38278 | SHC TRANSFORMING PROTEIN |
| Paelopatides38279 | SHC TRANSFORMING PROTEIN |
| Paelopatides38280 | VESICULAR MANNOSE-BINDING LECTIN |
| Paelopatides38281 | CARBOHYDRATE SULFOTRANSFERASE 15 |
| Paelopatides38282 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| Paelopatides38283 | |
| Paelopatides38284 | CENTROMERE PROTEIN T |
| Paelopatides38285 | SI:CH211-108C17.2-RELATED-RELATED |
