About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38336POL PROTEIN
Paelopatides38337ENDONUCLEASE-RELATED
Paelopatides38338PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides38339HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides38340TRANSPOSASE, PUTATIVE-RELATED
Paelopatides38341DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
Paelopatides38342NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides38343
Paelopatides38344-
Paelopatides38345PROTEIN CBG26694
Paelopatides38346ENDONUCLEASE-RELATED
Paelopatides38347E3 UBIQUITIN-PROTEIN LIGASE TOPORS
Paelopatides38348-
Paelopatides38349BETA-AMYLOID BINDING PROTEIN-RELATED
Paelopatides38350ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides38351PROTEIN CBG26694
Paelopatides38352
Paelopatides38353ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38354PROTEIN CBG26694
Paelopatides38355PROTEIN CBG26694
Paelopatides38356PROTEIN CBG26694
Paelopatides38357
Paelopatides38358JUN TRANSCRIPTION FACTOR-RELATED
Paelopatides38359
Paelopatides38360PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides38361
Paelopatides38362RAS GTPASE-ACTIVATING PROTEINS
Paelopatides38363
Paelopatides38364
Paelopatides38365PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides38366
Paelopatides38367
Paelopatides38368NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
Paelopatides38369EXPRESSED PROTEIN
Paelopatides38370
Paelopatides38371GUANYLYL CYCLASE
Paelopatides38373GUANYLYL CYCLASE
Paelopatides38374-
Paelopatides38375NAD(P) TRANSHYDROGENASE
Paelopatides38376NADP-SPECIFIC ISOCITRATE DEHYDROGENASE
Paelopatides38377NADP-SPECIFIC ISOCITRATE DEHYDROGENASE
Paelopatides38378
Paelopatides38379U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED
Paelopatides38380ALDO/KETO REDUCTASE
Paelopatides38381DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides38382DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
Paelopatides38383
Paelopatides38384
Paelopatides38385
Paelopatides38386E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER
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