The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides38437 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides38438 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides38439 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38440 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides38441 | |
Paelopatides38442 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38443 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides38444 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
Paelopatides38445 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Paelopatides38446 | S -2-HYDROXY-ACID OXIDASE-RELATED |
Paelopatides38447 | |
Paelopatides38448 | |
Paelopatides38449 | TRANSCRIPTION INITIATION FACTOR TFIID |
Paelopatides38450 | |
Paelopatides38451 | |
Paelopatides38452 | NETRIN RECEPTOR UNC5 |
Paelopatides38453 | |
Paelopatides38454 | PROTEIN TRANSPORT PROTEIN SEC23 |
Paelopatides38455 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Paelopatides38456 | PROTEIN TRANSPORT PROTEIN SEC23 |
Paelopatides38457 | KRAB DOMAIN C2H2 ZINC FINGER |
Paelopatides38458 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides38459 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38460 | |
Paelopatides38464 | POL PROTEIN |
Paelopatides38465 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides38466 | PROTEIN CBG26694 |
Paelopatides38467 | PROTEIN CBG26694 |
Paelopatides38468 | PROTEIN CBG26694 |
Paelopatides38469 | PROTEIN CBG26694 |
Paelopatides38470 | |
Paelopatides38471 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides38472 | ENDONUCLEASE |
Paelopatides38473 | ENDONUCLEASE |
Paelopatides38474 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38475 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38476 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38477 | |
Paelopatides38478 | EXPRESSED PROTEIN |
Paelopatides38479 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Paelopatides38480 | UNCHARACTERIZED |
Paelopatides38481 | UNCHARACTERIZED |
Paelopatides38482 | PROTEIN CBG26694 |
Paelopatides38483 | |
Paelopatides38484 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides38485 | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE |
Paelopatides38486 | TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED |
Paelopatides38487 | TRANSMEMBRANE PROTEIN 254 |
Paelopatides38488 | PROTEIN ECT2 |
Paelopatides38489 |