The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides38593 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38594 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38595 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38596 | SERINE/THREONINE-PROTEIN KINASE |
Paelopatides38597 | BONUS, ISOFORM C-RELATED |
Paelopatides38598 | SRR1-LIKE PROTEIN |
Paelopatides38599 | EXONUCLEASE V |
Paelopatides38600 | MICROTUBULE-ASSOCIATED PROTEIN |
Paelopatides38601 | |
Paelopatides38602 | PROTEIN MAGO NASHI HOMOLOG |
Paelopatides38603 | |
Paelopatides38604 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38605 | |
Paelopatides38606 | |
Paelopatides38607 | ACROSIN-RELATED |
Paelopatides38608 | TRANSPOSON |
Paelopatides38609 | |
Paelopatides38611 | |
Paelopatides38612 | WD REPEAT DOMAIN 9 |
Paelopatides38613 | WD REPEAT DOMAIN 9 |
Paelopatides38614 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Paelopatides38615 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Paelopatides38616 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Paelopatides38617 | WD REPEAT DOMAIN 9 |
Paelopatides38618 | DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER |
Paelopatides38619 | AP ENDONUCLEASE |
Paelopatides38620 | TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB |
Paelopatides38621 | |
Paelopatides38622 | MYOSIN REGULATORY LIGHT CHAIN 2 |
Paelopatides38623 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides38624 | POL PROTEIN |
Paelopatides38625 | POL PROTEIN |
Paelopatides38626 | |
Paelopatides38627 | |
Paelopatides38628 | |
Paelopatides38629 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38630 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38631 | IP01015P-RELATED |
Paelopatides38632 | UNCHARACTERIZED |
Paelopatides38633 | |
Paelopatides38634 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides38635 | TYROSINE-PROTEIN KINASE |
Paelopatides38636 | |
Paelopatides38637 | TYROSINE-PROTEIN KINASE |
Paelopatides38638 | |
Paelopatides38639 | PROTEIN CBG23806 |
Paelopatides38640 | |
Paelopatides38641 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides38642 | HYDROGENASE MATURATION FACTOR HOXX |
Paelopatides38643 | WSCD FAMILY MEMBER CG9164 |