The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides38748 | |
| Paelopatides38749 | - |
| Paelopatides38750 | 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38751 | |
| Paelopatides38752 | TRANSCRIPTIONAL ENHANCER FACTOR TEF RELATED |
| Paelopatides38753 | PARVIN |
| Paelopatides38754 | PERIODIC TRYPTOPHAN PROTEIN 1 |
| Paelopatides38755 | PERIODIC TRYPTOPHAN PROTEIN 1 |
| Paelopatides38756 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38757 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38758 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| Paelopatides38759 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
| Paelopatides38760 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38761 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38762 | - |
| Paelopatides38763 | - |
| Paelopatides38764 | - |
| Paelopatides38765 | SIMILAR TO CHROMOSOME 3 OPEN READING FRAME 20 |
| Paelopatides38766 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
| Paelopatides38767 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
| Paelopatides38768 | PROTEIN CBG26694 |
| Paelopatides38769 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
| Paelopatides38770 | ALKALINE CERAMIDASE 3 |
| Paelopatides38771 | |
| Paelopatides38772 | PROTEIN SIDEKICK |
| Paelopatides38773 | - |
| Paelopatides38774 | PROTEIN SIDEKICK |
| Paelopatides38775 | |
| Paelopatides38776 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
| Paelopatides38777 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
| Paelopatides38778 | PEPTIDOGLYCAN RECOGNITION PROTEIN |
| Paelopatides38779 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides38780 | |
| Paelopatides38781 | OPSIN |
| Paelopatides38782 | RETROTRANSPOSON |
| Paelopatides38783 | |
| Paelopatides38784 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides38785 | |
| Paelopatides38786 | PERICENTRIN-LIKE PROTEIN, ISOFORM F |
| Paelopatides38787 | PERICENTRIN-LIKE PROTEIN, ISOFORM F |
| Paelopatides38788 | |
| Paelopatides38789 | |
| Paelopatides38790 | PROTEIN CBG26694 |
| Paelopatides38791 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| Paelopatides38792 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
| Paelopatides38793 | E3 UBIQUITIN-PROTEIN LIGASE RNF8 |
| Paelopatides38794 | PARANEOPLASTIC ANTIGEN |
| Paelopatides38795 | PROTEIN CBG26694 |
| Paelopatides38796 | |
| Paelopatides38797 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
