About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38798
Paelopatides38799MYOSIN
Paelopatides38800CLATHRIN ASSEMBLY PROTEIN
Paelopatides38801SEC63 DOMAIN-CONTAINING
Paelopatides38802SEC63 DOMAIN-CONTAINING
Paelopatides38803DPY-19-LIKE 1, LIKE (H. SAPIENS)
Paelopatides38804AUTOPHAGY PROTEIN 5
Paelopatides38805ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides38806INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides38807TRANSPOSABLE ELEMENT-RELATED
Paelopatides38808HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides38809HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides38810
Paelopatides38811CGI-41 METHYLTRANSFERASE
Paelopatides38812
Paelopatides38813
Paelopatides38814CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides38815TYROSINE-PROTEIN KINASE
Paelopatides38816TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides38817TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides38818TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides38819PROTON MYO-INOSITOL COTRANSPORTER
Paelopatides38820PROTON MYO-INOSITOL COTRANSPORTER
Paelopatides38821ARYLSULFATASE FAMILY MEMBER
Paelopatides38822
Paelopatides38823ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides38824
Paelopatides38825FCH AND DOUBLE SH3 DOMAINS PROTEIN
Paelopatides38826FCH AND DOUBLE SH3 DOMAINS PROTEIN
Paelopatides38827FCH AND DOUBLE SH3 DOMAINS PROTEIN
Paelopatides38828
Paelopatides38829CLASS IV SAM-BINDING METHYLTRANSFERASE-RELATED
Paelopatides38830IMMEDIATE EARLY RESPONSE GENE
Paelopatides38831
Paelopatides38832PROTEIN CBG26694
Paelopatides38833SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B
Paelopatides38834RETROTRANSPOSON
Paelopatides38835PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides38836
Paelopatides38837TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides38838
Paelopatides38839E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Paelopatides38840OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides38841
Paelopatides38842SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides38843PROTEIN CBG26694
Paelopatides38844ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides38845
Paelopatides38846REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38847
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