The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides38898 | |
Paelopatides38899 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides38900 | CARBOHYDRATE SULFOTRANSFERASE 15 |
Paelopatides38901 | |
Paelopatides38902 | |
Paelopatides38903 | REVERSE TRANSCRIPTASES |
Paelopatides38904 | ACTIN |
Paelopatides38905 | ACTIN |
Paelopatides38906 | ACTIN |
Paelopatides38907 | ACTIN |
Paelopatides38908 | ACTIN |
Paelopatides38909 | ACTIN |
Paelopatides38910 | NOTCH LIGAND FAMILY MEMBER |
Paelopatides38911 | |
Paelopatides38912 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides38913 | TRANSPOSON |
Paelopatides38914 | PROTEIN CBG26694 |
Paelopatides38915 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides38916 | |
Paelopatides38917 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38918 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38919 | |
Paelopatides38921 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38922 | BIS(5'-ADENOSYL)-TRIPHOSPHATASE |
Paelopatides38923 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
Paelopatides38924 | |
Paelopatides38925 | PROTEIN ABHD14B-LIKE |
Paelopatides38926 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
Paelopatides38927 | PROTEIN CBG26694 |
Paelopatides38928 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Paelopatides38929 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
Paelopatides38930 | |
Paelopatides38931 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides38932 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides38933 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38934 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides38935 | PROTEIN CBG26694 |
Paelopatides38936 | |
Paelopatides38937 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38938 | |
Paelopatides38939 | TRANSPOSON |
Paelopatides38940 | CAMK FAMILY PROTEIN KINASE |
Paelopatides38941 | PROSTAGLANDIN REDUCTASE |
Paelopatides38942 | ELONGATION FACTOR TS |
Paelopatides38943 | REGULATOR OF G PROTEIN SIGNALING |
Paelopatides38944 | KREMEN PROTEIN |
Paelopatides38945 | TYROSINE-PROTEIN KINASE |
Paelopatides38946 | |
Paelopatides38947 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides38948 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |