The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides38696 | |
Paelopatides38697 | TRANSCRIPTION FACTOR E2F |
Paelopatides38698 | OXIDOREDUCTASE-RELATED |
Paelopatides38699 | |
Paelopatides38700 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Paelopatides38701 | SUSHI DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides38702 | |
Paelopatides38703 | |
Paelopatides38704 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
Paelopatides38705 | PROTEIN CBG26694 |
Paelopatides38706 | BETA-TUBULIN COFACTOR D |
Paelopatides38708 | TETRATRICOPEPTIDE REPEAT PROTEIN 13 |
Paelopatides38709 | TELOMERASE REVERSE TRANSCRIPTASE |
Paelopatides38710 | |
Paelopatides38711 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38712 | TELOMERASE REVERSE TRANSCRIPTASE |
Paelopatides38713 | TELOMERASE REVERSE TRANSCRIPTASE |
Paelopatides38714 | |
Paelopatides38715 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38716 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38717 | UREASE ACCESSORY PROTEIN F |
Paelopatides38718 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides38719 | |
Paelopatides38720 | ENDONUCLEASE-RELATED |
Paelopatides38721 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides38722 | CROSSVEINLESS 2 |
Paelopatides38723 | |
Paelopatides38724 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13B |
Paelopatides38725 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13B |
Paelopatides38726 | PROTEIN CBG26694 |
Paelopatides38727 | ALPHA-GLUCOSIDASE |
Paelopatides38728 | G-PROTEIN COUPLED RECEPTOR |
Paelopatides38729 | |
Paelopatides38730 | |
Paelopatides38731 | STROMAL ANTIGEN |
Paelopatides38732 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides38733 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Paelopatides38735 | G DOMAIN-CONTAINING PROTEIN |
Paelopatides38736 | - |
Paelopatides38737 | PROPERDIN |
Paelopatides38738 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38739 | 39S RIBOSOMAL PROTEIN L43 |
Paelopatides38740 | UNCHARACTERIZED |
Paelopatides38741 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38742 | |
Paelopatides38743 | EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED |
Paelopatides38744 | PROTEIN CBG26694 |
Paelopatides38745 | AROMATIC AMINO ACID HYDROXYLASE |
Paelopatides38746 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides38747 |