About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39211
Paelopatides39212C3ORF6 PROTEIN-RELATED
Paelopatides39213
Paelopatides39214
Paelopatides39215
Paelopatides39216
Paelopatides39217
Paelopatides39218
Paelopatides39219ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides39220ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides39221HEPACAM FAMILY MEMBER 2-RELATED
Paelopatides39222CONTACTIN 5
Paelopatides39223
Paelopatides39224ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides39225PROTEIN CBG26694
Paelopatides39226INHIBITOR OF GROWTH PROTEIN
Paelopatides39227TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides39228ACROSIN-RELATED
Paelopatides39230ANNEXIN
Paelopatides39231GENE, 17359-RELATED
Paelopatides39232
Paelopatides39233
Paelopatides39234DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides39235CERAMIDASE
Paelopatides39236CERAMIDASE
Paelopatides39237CERAMIDASE
Paelopatides39238CERAMIDASE
Paelopatides39243
Paelopatides39244RETROTRANSPOSON
Paelopatides39245PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides39246RETROTRANSPOSON
Paelopatides39247RETROTRANSPOSON
Paelopatides39248CERAMIDASE
Paelopatides39249
Paelopatides39250TOLL-INTERACTING PROTEIN
Paelopatides39251
Paelopatides39252RHO GTPASE-ACTIVATING PROTEIN 100F
Paelopatides39253RHO GTPASE-ACTIVATING PROTEIN 100F
Paelopatides39254METAL TRANSPORTER CNNM
Paelopatides39255METAL TRANSPORTER CNNM
Paelopatides39256DDB1- AND CUL4-ASSOCIATED FACTOR 10
Paelopatides3925726S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4
Paelopatides39258RING/U-BOX SUPERFAMILY PROTEIN
Paelopatides39259STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Paelopatides39260EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 9
Paelopatides39261TRANSMEMBRANE PROTEIN 127
Paelopatides39262BADF TYPE ATPASE DOMAIN-CONTAINING PROTEIN
Paelopatides39263ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides39264
Paelopatides39265
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