The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides39211 | |
Paelopatides39212 | C3ORF6 PROTEIN-RELATED |
Paelopatides39213 | |
Paelopatides39214 | |
Paelopatides39215 | |
Paelopatides39216 | |
Paelopatides39217 | |
Paelopatides39218 | |
Paelopatides39219 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides39220 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39221 | HEPACAM FAMILY MEMBER 2-RELATED |
Paelopatides39222 | CONTACTIN 5 |
Paelopatides39223 | |
Paelopatides39224 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides39225 | PROTEIN CBG26694 |
Paelopatides39226 | INHIBITOR OF GROWTH PROTEIN |
Paelopatides39227 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
Paelopatides39228 | ACROSIN-RELATED |
Paelopatides39230 | ANNEXIN |
Paelopatides39231 | GENE, 17359-RELATED |
Paelopatides39232 | |
Paelopatides39233 | |
Paelopatides39234 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides39235 | CERAMIDASE |
Paelopatides39236 | CERAMIDASE |
Paelopatides39237 | CERAMIDASE |
Paelopatides39238 | CERAMIDASE |
Paelopatides39243 | |
Paelopatides39244 | RETROTRANSPOSON |
Paelopatides39245 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides39246 | RETROTRANSPOSON |
Paelopatides39247 | RETROTRANSPOSON |
Paelopatides39248 | CERAMIDASE |
Paelopatides39249 | |
Paelopatides39250 | TOLL-INTERACTING PROTEIN |
Paelopatides39251 | |
Paelopatides39252 | RHO GTPASE-ACTIVATING PROTEIN 100F |
Paelopatides39253 | RHO GTPASE-ACTIVATING PROTEIN 100F |
Paelopatides39254 | METAL TRANSPORTER CNNM |
Paelopatides39255 | METAL TRANSPORTER CNNM |
Paelopatides39256 | DDB1- AND CUL4-ASSOCIATED FACTOR 10 |
Paelopatides39257 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 |
Paelopatides39258 | RING/U-BOX SUPERFAMILY PROTEIN |
Paelopatides39259 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 |
Paelopatides39260 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 9 |
Paelopatides39261 | TRANSMEMBRANE PROTEIN 127 |
Paelopatides39262 | BADF TYPE ATPASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39263 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39264 | |
Paelopatides39265 |