The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides39628 | SULFOTRANSFERASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39629 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides39630 | NICE-3 |
Paelopatides39631 | |
Paelopatides39632 | |
Paelopatides39633 | |
Paelopatides39634 | - |
Paelopatides39635 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39638 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39639 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
Paelopatides39640 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides39641 | |
Paelopatides39642 | |
Paelopatides39643 | N-TERMINAL ACETYLTRANSFERASE-RELATED |
Paelopatides39644 | DNA POLYMERASE DELTA SUBUNIT 3 |
Paelopatides39645 | |
Paelopatides39646 | |
Paelopatides39647 | |
Paelopatides39648 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
Paelopatides39649 | REVERSE TRANSCRIPTASES |
Paelopatides39650 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39651 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
Paelopatides39652 | RE48077P |
Paelopatides39653 | |
Paelopatides39654 | SIDEROFLEXIN |
Paelopatides39655 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39656 | |
Paelopatides39657 | |
Paelopatides39658 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Paelopatides39659 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39660 | |
Paelopatides39661 | CLASPIN |
Paelopatides39662 | PEPTIDASE |
Paelopatides39663 | |
Paelopatides39664 | SODIUM/CALCIUM EXCHANGER |
Paelopatides39665 | CLASPIN |
Paelopatides39666 | |
Paelopatides39667 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
Paelopatides39668 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
Paelopatides39669 | - |
Paelopatides39670 | |
Paelopatides39671 | |
Paelopatides39672 | SODIUM/CALCIUM EXCHANGER |
Paelopatides39673 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
Paelopatides39674 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
Paelopatides39675 | PROTEIN CBG26694 |
Paelopatides39676 | |
Paelopatides39677 | |
Paelopatides39678 | PROTEIN CBG26694 |
Paelopatides39679 |