About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39628SULFOTRANSFERASE DOMAIN-CONTAINING PROTEIN
Paelopatides39629TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides39630NICE-3
Paelopatides39631
Paelopatides39632
Paelopatides39633
Paelopatides39634-
Paelopatides39635REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39638ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides39639LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Paelopatides39640HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides39641
Paelopatides39642
Paelopatides39643N-TERMINAL ACETYLTRANSFERASE-RELATED
Paelopatides39644DNA POLYMERASE DELTA SUBUNIT 3
Paelopatides39645
Paelopatides39646
Paelopatides39647
Paelopatides39648CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Paelopatides39649REVERSE TRANSCRIPTASES
Paelopatides39650REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39651TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
Paelopatides39652RE48077P
Paelopatides39653
Paelopatides39654SIDEROFLEXIN
Paelopatides39655ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides39656
Paelopatides39657
Paelopatides39658GTP-BINDING PROTEIN ALPHA SUBUNIT
Paelopatides39659REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39660
Paelopatides39661CLASPIN
Paelopatides39662PEPTIDASE
Paelopatides39663
Paelopatides39664SODIUM/CALCIUM EXCHANGER
Paelopatides39665CLASPIN
Paelopatides39666
Paelopatides39667MYOTONIC DYSTROPHY S/T KINASE-RELATED
Paelopatides39668MYOTONIC DYSTROPHY S/T KINASE-RELATED
Paelopatides39669-
Paelopatides39670
Paelopatides39671
Paelopatides39672SODIUM/CALCIUM EXCHANGER
Paelopatides39673LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Paelopatides39674MYOTONIC DYSTROPHY S/T KINASE-RELATED
Paelopatides39675PROTEIN CBG26694
Paelopatides39676
Paelopatides39677
Paelopatides39678PROTEIN CBG26694
Paelopatides39679
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