The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides39988 | |
| Paelopatides39990 | |
| Paelopatides39991 | SI:CH211-196P9.1-RELATED |
| Paelopatides39992 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| Paelopatides39993 | PROTEIN EVA-1 |
| Paelopatides39994 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39995 | LYSYL OXIDASE-LIKE-RELATED |
| Paelopatides39996 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides39997 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides39998 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides39999 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides40000 | |
| Paelopatides40001 | PLEXIN |
| Paelopatides40002 | CGI-121 FAMILY MEMBER |
| Paelopatides40003 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides40004 | PROTEIN CBG26694 |
| Paelopatides40005 | PROTEIN CBG26694 |
| Paelopatides40006 | ENDONUCLEASE-RELATED |
| Paelopatides40007 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides40008 | INTRAFLAGELLAR TRANSPORT PROTEIN 25 HOMOLOG |
| Paelopatides40009 | |
| Paelopatides40010 | UNCHARACTERIZED |
| Paelopatides40011 | ZINC FINGER PROTEIN AEBP2 |
| Paelopatides40012 | - |
| Paelopatides40013 | PERIAXIN-LIKE |
| Paelopatides40014 | |
| Paelopatides40015 | TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1 |
| Paelopatides40016 | MITOCHONDRIA-EATING PROTEIN-RELATED |
| Paelopatides40017 | JM1 PROTEIN |
| Paelopatides40018 | TIMEOUT/TIMELESS-2 |
| Paelopatides40019 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides40020 | BILE ACID BETA-GLUCOSIDASE-RELATED |
| Paelopatides40021 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| Paelopatides40022 | BILE ACID BETA-GLUCOSIDASE-RELATED |
| Paelopatides40023 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides40025 | TESTIS-EXPRESSED PROTEIN 52 |
| Paelopatides40026 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides40027 | |
| Paelopatides40028 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides40029 | |
| Paelopatides40030 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| Paelopatides40031 | |
| Paelopatides40032 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides40033 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides40034 | BTB/POZ DOMAIN-CONTAINING PROTEIN 16 |
| Paelopatides40035 | |
| Paelopatides40036 | COILED-COIL DOMAIN-CONTAINING PROTEIN 189 |
| Paelopatides40037 | |
| Paelopatides40038 | |
| Paelopatides40039 | RETROTRANSPOSON |
