The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides40152 | SERINE/THREONINE PROTEIN PHOSPHATASE |
Paelopatides40153 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
Paelopatides40154 | |
Paelopatides40155 | |
Paelopatides40156 | |
Paelopatides40157 | PARANEOPLASTIC ANTIGEN |
Paelopatides40158 | PEPTIDASE S8 |
Paelopatides40161 | |
Paelopatides40162 | |
Paelopatides40163 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides40164 | PROTEIN CBG26694 |
Paelopatides40165 | |
Paelopatides40166 | HEMOPEXIN DOMAIN-CONTAINING PROTEIN |
Paelopatides40167 | |
Paelopatides40169 | NATTERIN-4 |
Paelopatides40170 | |
Paelopatides40171 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides40172 | IP13529P |
Paelopatides40173 | FAS-ASSOCIATED PROTEIN |
Paelopatides40174 | |
Paelopatides40175 | NETRIN RECEPTOR UNC5 |
Paelopatides40176 | CENTROSOMAL PROTEIN 2 |
Paelopatides40177 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40178 | BONUS, ISOFORM C-RELATED |
Paelopatides40179 | BONUS, ISOFORM C-RELATED |
Paelopatides40180 | |
Paelopatides40181 | |
Paelopatides40182 | |
Paelopatides40183 | MRNA-CAPPING ENZYME |
Paelopatides40184 | |
Paelopatides40185 | BONUS, ISOFORM C-RELATED |
Paelopatides40186 | PROTEIN CBG26694 |
Paelopatides40187 | FI04643P-RELATED |
Paelopatides40188 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides40189 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
Paelopatides40190 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40191 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40192 | BEN DOMAIN-CONTAINING PROTEIN 5 |
Paelopatides40193 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Paelopatides40195 | |
Paelopatides40196 | FRUCTOSE-1,6-BISPHOSPHATASE-RELATED |
Paelopatides40197 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40198 | MONOACYLGLYCEROL LIPASE |
Paelopatides40199 | UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED |
Paelopatides40200 | |
Paelopatides40201 | PHOSPHATIDYLINOSITOL TRANSFER PROTEIN |
Paelopatides40202 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides40203 | PROTEIN CBG23806 |
Paelopatides40204 | |
Paelopatides40205 | SI:CH211-108C17.2-RELATED-RELATED |