The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides40679 | |
| Paelopatides40680 | SI:CH211-196P9.1-RELATED |
| Paelopatides40681 | |
| Paelopatides40682 | INTEGRASE_SAM-LIKE_N DOMAIN-CONTAINING PROTEIN |
| Paelopatides40685 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides40686 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides40687 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides40688 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| Paelopatides40689 | |
| Paelopatides40690 | |
| Paelopatides40691 | |
| Paelopatides40692 | MONOCARBOXYLATE TRANSPORTER |
| Paelopatides40693 | |
| Paelopatides40694 | |
| Paelopatides40695 | UNCHARACTERIZED |
| Paelopatides40696 | |
| Paelopatides40697 | RETROTRANSPOSON |
| Paelopatides40698 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides40699 | RETROTRANSPOSON |
| Paelopatides40700 | RETROTRANSPOSON |
| Paelopatides40701 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides40702 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides40703 | |
| Paelopatides40706 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| Paelopatides40707 | 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)] |
| Paelopatides40708 | |
| Paelopatides40709 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides40710 | |
| Paelopatides40711 | INTEGRASE_SAM-LIKE_N DOMAIN-CONTAINING PROTEIN |
| Paelopatides40712 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides40713 | E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER |
| Paelopatides40714 | PROTEIN CBG26694 |
| Paelopatides40715 | TRANSAMIDASE |
| Paelopatides40716 | BUCENTAUR RELATED |
| Paelopatides40717 | |
| Paelopatides40718 | |
| Paelopatides40719 | AMINOTRANSFERASE |
| Paelopatides40720 | PROTEIN CBG26694 |
| Paelopatides40721 | |
| Paelopatides40722 | |
| Paelopatides40723 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Paelopatides40724 | MATING RESPONSE PROTEIN POI2 |
| Paelopatides40725 | |
| Paelopatides40726 | SEC14 RELATED PROTEIN |
| Paelopatides40727 | |
| Paelopatides40728 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides40729 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides40730 | |
| Paelopatides40731 | |
| Paelopatides40732 |
