The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides40940 | |
| Paelopatides40941 | |
| Paelopatides40942 | JUNCTIONAL ADHESION MOLECULE B |
| Paelopatides40943 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| Paelopatides40944 | AGAP005574-PA |
| Paelopatides40945 | |
| Paelopatides40946 | |
| Paelopatides40947 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| Paelopatides40948 | |
| Paelopatides40949 | GABA-B RECEPTOR |
| Paelopatides40950 | |
| Paelopatides40951 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides40952 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
| Paelopatides40953 | MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49 |
| Paelopatides40954 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| Paelopatides40955 | |
| Paelopatides40956 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| Paelopatides40957 | |
| Paelopatides40958 | |
| Paelopatides40959 | |
| Paelopatides40960 | |
| Paelopatides40961 | |
| Paelopatides40962 | RIBONUCLEASE |
| Paelopatides40963 | |
| Paelopatides40964 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| Paelopatides40965 | PROTEIN CBG26694 |
| Paelopatides40966 | |
| Paelopatides40969 | MATING RESPONSE PROTEIN POI2 |
| Paelopatides40970 | VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL |
| Paelopatides40971 | |
| Paelopatides40972 | EXPRESSED PROTEIN |
| Paelopatides40973 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides40974 | ZGC:195170 |
| Paelopatides40975 | POL PROTEIN |
| Paelopatides40976 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides40977 | NETRIN/LAMININ-RELATED |
| Paelopatides40978 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides40979 | BREAST CANCER ANTI-ESTROGEN RESISTANCE PROTEIN 3 HOMOLOG-LIKE PROTEIN |
| Paelopatides40980 | AMINOTRANSFERASE |
| Paelopatides40981 | AMINOTRANSFERASE |
| Paelopatides40982 | CYTOSOLIC CARBOXYPEPTIDASE |
| Paelopatides40983 | |
| Paelopatides40984 | |
| Paelopatides40985 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides40986 | CYTOCHROME C OXIDASE SUBUNIT VIIC |
| Paelopatides40987 | |
| Paelopatides40988 | PROTEIN CBG26694 |
| Paelopatides40989 | |
| Paelopatides40990 | |
| Paelopatides40991 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
