About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41885OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides41886OPTICIN
Paelopatides41887
Paelopatides41888ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides41889REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41890PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides41893UNCHARACTERIZED
Paelopatides41894RIBOSOME RECYCLING FACTOR
Paelopatides41895L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides41897
Paelopatides41898
Paelopatides41899POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
Paelopatides41900
Paelopatides41901FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41902REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41903FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41904
Paelopatides41905FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41906TRANSPOSON
Paelopatides41907
Paelopatides41908TUBULIN
Paelopatides41909TUBULIN
Paelopatides41910CYTOCHROME P450 508A4-RELATED
Paelopatides41911DNA REPAIR ENDONUCLEASE XPF
Paelopatides41912SNF2/RAD54 HELICASE FAMILY
Paelopatides41913SNF2/RAD54 HELICASE FAMILY
Paelopatides41914PROTEIN CBG26694
Paelopatides41915
Paelopatides41916TOLL-INTERACTING PROTEIN
Paelopatides41917
Paelopatides41918
Paelopatides41919REVERSE TRANSCRIPTASES
Paelopatides41920SPERM-SPECIFIC FAMILY, CLASS Q
Paelopatides41921CEREBELLIN-RELATED
Paelopatides41922
Paelopatides41923ECTO-NOX DISULFIDE-THIOL EXCHANGER
Paelopatides41924PARANEOPLASTIC ANTIGEN
Paelopatides41925PROTEIN CBG26694
Paelopatides41926ECTO-NOX DISULFIDE-THIOL EXCHANGER
Paelopatides41927CYTIDYLYLTRANSFERASE
Paelopatides41928DNA POLYMERASE ALPHA CATALYTIC SUBUNIT
Paelopatides41929
Paelopatides41930IMPORTIN ALPHA
Paelopatides41931
Paelopatides41932SERINE/THREONINE-PROTEIN KINASE
Paelopatides41933MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
Paelopatides41934
Paelopatides41935
Paelopatides41936EXPRESSED PROTEIN
Paelopatides41937
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