The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides42042 | |
| Paelopatides42043 | ZINC FINGER PROTEIN 200 |
| Paelopatides42044 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides42045 | |
| Paelopatides42046 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42047 | PROTEIN CBG26694 |
| Paelopatides42048 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42049 | IP13529P |
| Paelopatides42050 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides42051 | GAG-RELATED PROTEIN |
| Paelopatides42052 | |
| Paelopatides42053 | GAG-RELATED PROTEIN |
| Paelopatides42054 | ANDROGEN-INDUCED PROTEIN 1-RELATED |
| Paelopatides42055 | |
| Paelopatides42056 | ANDROGEN-INDUCED PROTEIN 1-RELATED |
| Paelopatides42057 | ANDROGEN-INDUCED PROTEIN 1-RELATED |
| Paelopatides42058 | |
| Paelopatides42059 | TRANSLATION INITIATION FACTOR EIF-2B |
| Paelopatides42060 | PROTEIN PATCHED |
| Paelopatides42061 | PROTEIN PATCHED |
| Paelopatides42062 | PROTEIN PATCHED |
| Paelopatides42063 | PROTEIN PATCHED |
| Paelopatides42065 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides42066 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides42067 | TRANSPOSON |
| Paelopatides42068 | - |
| Paelopatides42069 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides42070 | RETROTRANSPOSON |
| Paelopatides42071 | |
| Paelopatides42072 | |
| Paelopatides42073 | |
| Paelopatides42074 | |
| Paelopatides42075 | |
| Paelopatides42076 | |
| Paelopatides42077 | |
| Paelopatides42078 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides42079 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides42080 | PROTEIN, PUTATIVE-RELATED |
| Paelopatides42081 | |
| Paelopatides42082 | |
| Paelopatides42084 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
| Paelopatides42085 | |
| Paelopatides42086 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| Paelopatides42087 | CORONIN |
| Paelopatides42089 | COLORECTAL MUTANT CANCER PROTEIN MCC PROTEIN -RELATED |
| Paelopatides42090 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42091 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides42092 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides42093 | |
| Paelopatides42094 | E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER |
