About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides42199PROTEIN CBG26694
Paelopatides42200RIIA DOMAIN-CONTAINING PROTEIN 1
Paelopatides42201KNIRPS-RELATED PROTEIN-RELATED
Paelopatides42202EPM2A-INTERACTING PROTEIN 1
Paelopatides42203POL PROTEIN
Paelopatides42204KNIRPS-RELATED PROTEIN-RELATED
Paelopatides42205HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26
Paelopatides42206PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides42207PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Paelopatides42208DNA LIGASE
Paelopatides42209
Paelopatides42210
Paelopatides42211
Paelopatides42212PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides42213SMAD
Paelopatides42214REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42215
Paelopatides42216
Paelopatides42217ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides42218
Paelopatides42219SMAD
Paelopatides42220RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides42221SMAD
Paelopatides42222ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides42226ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides42227KNIRPS-RELATED PROTEIN-RELATED
Paelopatides42228PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides42229
Paelopatides42230
Paelopatides42231LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2
Paelopatides42232PROTEIN CBG26694
Paelopatides42233
Paelopatides42234BONUS, ISOFORM C-RELATED
Paelopatides42236
Paelopatides42237REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42238FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Paelopatides42239
Paelopatides42240FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides42241REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42242OS05G0310600 PROTEIN
Paelopatides42243
Paelopatides42244SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides42245PROTEIN CBG26694
Paelopatides42246G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides42247LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides42248REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42249
Paelopatides42250-
Paelopatides42251
Paelopatides42252PROTEIN SIDEKICK
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