The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides42509 | UNC-13-4A, ISOFORM B |
Paelopatides42510 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42511 | COILED-COIL DOMAIN-CONTAINING PROTEIN 173 |
Paelopatides42512 | PER1-RELATED |
Paelopatides42513 | PER1-RELATED |
Paelopatides42514 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42515 | |
Paelopatides42516 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
Paelopatides42517 | ZINC FINGER MYND DOMAIN-CONTAINING |
Paelopatides42518 | |
Paelopatides42519 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
Paelopatides42520 | SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1 |
Paelopatides42521 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides42524 | CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4 |
Paelopatides42525 | CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4 |
Paelopatides42526 | ZINC FINGER PROTEIN |
Paelopatides42527 | |
Paelopatides42528 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides42529 | - |
Paelopatides42530 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides42531 | PROTEIN CBG26694 |
Paelopatides42532 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42533 | |
Paelopatides42534 | SOLUTE CARRIER FAMILY 35 MEMBER B |
Paelopatides42535 | |
Paelopatides42536 | UNCHARACTERIZED |
Paelopatides42537 | ENDONUCLEASE-RELATED |
Paelopatides42538 | DYNEIN HEAVY CHAIN |
Paelopatides42539 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides42540 | DYNEIN HEAVY CHAIN |
Paelopatides42541 | |
Paelopatides42542 | TIGHT JUNCTION PROTEIN |
Paelopatides42543 | ANTIGEN BSP, PUTATIVE-RELATED |
Paelopatides42544 | |
Paelopatides42545 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42546 | BUCENTAUR RELATED |
Paelopatides42547 | |
Paelopatides42548 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42549 | |
Paelopatides42550 | |
Paelopatides42551 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides42552 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides42553 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42554 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides42555 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42556 | |
Paelopatides42557 | ZINC FINGER PROTEIN ZIC AND GLI |
Paelopatides42558 | ZINC FINGER PROTEIN |
Paelopatides42559 | |
Paelopatides42560 | RWD DOMAIN-CONTAINING PROTEIN 3 |