The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides42664 | |
Paelopatides42665 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides42666 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42667 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides42668 | PROTEIN CBG26694 |
Paelopatides42669 | SULFATE TRANSPORTER |
Paelopatides42670 | CAVEOLIN |
Paelopatides42671 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides42672 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides42673 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides42675 | FTP DOMAIN-CONTAINING PROTEIN |
Paelopatides42676 | |
Paelopatides42677 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42678 | BUCENTAUR RELATED |
Paelopatides42679 | |
Paelopatides42680 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides42681 | RETROTRANSPOSON |
Paelopatides42682 | RETROTRANSPOSON |
Paelopatides42683 | |
Paelopatides42684 | ZINC FINGER PROTEIN |
Paelopatides42685 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides42686 | REVERSE TRANSCRIPTASES |
Paelopatides42687 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42688 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Paelopatides42689 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
Paelopatides42690 | UNCHARACTERIZED |
Paelopatides42691 | AGAP001331-PA-RELATED |
Paelopatides42692 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
Paelopatides42693 | |
Paelopatides42694 | |
Paelopatides42696 | |
Paelopatides42697 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides42698 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides42699 | |
Paelopatides42700 | MATRIX METALLOPROTEINASE |
Paelopatides42701 | BLUE CHEESE |
Paelopatides42702 | BLUE CHEESE |
Paelopatides42703 | BLUE CHEESE |
Paelopatides42704 | |
Paelopatides42705 | |
Paelopatides42706 | PURPLE ACID PHOSPHATASE |
Paelopatides42707 | RIBONUCLEASE P SUBUNIT P29 |
Paelopatides42708 | ADENYLATE CYCLASE TYPE 1 |
Paelopatides42709 | |
Paelopatides42710 | - |
Paelopatides42711 | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED |
Paelopatides42712 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42713 | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED |
Paelopatides42714 | RNA HELICASE |
Paelopatides42715 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |