The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides42406 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42407 | |
Paelopatides42408 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
Paelopatides42409 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides42410 | PTD012 PROTEIN |
Paelopatides42411 | DNA REPAIR PROTEIN RAD51 HOMOLOG 4 |
Paelopatides42412 | AGAP008810-PA |
Paelopatides42413 | VITELLOGENIN-RELATED |
Paelopatides42414 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42415 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides42416 | CADHERIN-23 |
Paelopatides42417 | DESMOGLEIN FAMILY MEMBER |
Paelopatides42418 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42419 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42420 | NETRIN RECEPTOR UNC5 |
Paelopatides42421 | |
Paelopatides42422 | ARMADILLO REPEAT CONTAINING 2 |
Paelopatides42423 | ARMADILLO REPEAT CONTAINING 2 |
Paelopatides42424 | PINSTRIPE, ISOFORM A |
Paelopatides42425 | PINSTRIPE, ISOFORM A |
Paelopatides42426 | |
Paelopatides42427 | |
Paelopatides42428 | PROTEIN CBG26694 |
Paelopatides42429 | PROTEIN CBG26694 |
Paelopatides42430 | IFT140/172-RELATED |
Paelopatides42431 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42432 | |
Paelopatides42433 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42434 | SPERMATOGENESIS ASSOCIATED 11-RELATED |
Paelopatides42435 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 57 |
Paelopatides42436 | UNCHARACTERIZED |
Paelopatides42437 | DNAJ HOMOLOG SUBFAMILY C MEMBER 21 |
Paelopatides42438 | SPERMATOGENESIS ASSOCIATED 11-RELATED |
Paelopatides42439 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 57 |
Paelopatides42440 | 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE |
Paelopatides42441 | |
Paelopatides42442 | |
Paelopatides42443 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42444 | |
Paelopatides42445 | |
Paelopatides42447 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
Paelopatides42448 | |
Paelopatides42449 | |
Paelopatides42450 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides42451 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42452 | |
Paelopatides42453 | |
Paelopatides42454 | |
Paelopatides42455 | |
Paelopatides42456 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |