The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides42561 | RWD DOMAIN-CONTAINING PROTEIN 3 |
Paelopatides42562 | PROTEIN CBG26694 |
Paelopatides42563 | PROTEIN CBG26694 |
Paelopatides42564 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides42565 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides42566 | ACROSIN-RELATED |
Paelopatides42567 | |
Paelopatides42568 | PROTEIN CBG26694 |
Paelopatides42569 | |
Paelopatides42570 | |
Paelopatides42571 | PORPHOBILINOGEN DEAMINASE |
Paelopatides42572 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42573 | BUCENTAUR RELATED |
Paelopatides42574 | SI:CH211-196P9.1-RELATED |
Paelopatides42575 | OS05G0310600 PROTEIN |
Paelopatides42576 | PLEXIN |
Paelopatides42577 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides42578 | PLEXIN |
Paelopatides42579 | |
Paelopatides42580 | |
Paelopatides42581 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42582 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42583 | |
Paelopatides42584 | FIBROUS SHEATH INTERACTING PROTEIN 1 |
Paelopatides42585 | FIBROUS SHEATH INTERACTING PROTEIN 1 |
Paelopatides42586 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
Paelopatides42587 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
Paelopatides42588 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
Paelopatides42589 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides42590 | OPSIN |
Paelopatides42591 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides42592 | EXPRESSED PROTEIN |
Paelopatides42593 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
Paelopatides42594 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42595 | CYTOCHROME C OXIDASE SUBUNIT IV |
Paelopatides42596 | CYTOCHROME C1 |
Paelopatides42597 | CYTOCHROME C1 |
Paelopatides42598 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides42599 | |
Paelopatides42600 | |
Paelopatides42601 | |
Paelopatides42602 | |
Paelopatides42603 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
Paelopatides42604 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides42605 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides42606 | NUCLEAR HORMONE RECEPTOR |
Paelopatides42607 | |
Paelopatides42608 | |
Paelopatides42609 | |
Paelopatides42610 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |