The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides42767 | COLLAGEN ALPHA |
Paelopatides42768 | COLLAGEN ALPHA |
Paelopatides42769 | |
Paelopatides42770 | ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN |
Paelopatides42771 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42772 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42773 | |
Paelopatides42774 | WINGS APART-LIKE PROTEIN HOMOLOG |
Paelopatides42775 | WINGS APART-LIKE PROTEIN HOMOLOG |
Paelopatides42776 | |
Paelopatides42777 | MASK PROTEIN |
Paelopatides42778 | |
Paelopatides42779 | DNA-DIRECTED RNA POLYMERASE |
Paelopatides42780 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42781 | REVERSE TRANSCRIPTASES |
Paelopatides42782 | DNA-DIRECTED RNA POLYMERASE |
Paelopatides42783 | |
Paelopatides42784 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42785 | NOTCH LIGAND FAMILY MEMBER |
Paelopatides42786 | UNCHARACTERIZED |
Paelopatides42787 | |
Paelopatides42788 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides42789 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides42790 | ENDONUCLEASE-RELATED |
Paelopatides42791 | ENDONUCLEASE-RELATED |
Paelopatides42792 | FI04643P-RELATED |
Paelopatides42793 | |
Paelopatides42794 | UNCHARACTERIZED |
Paelopatides42795 | SERINE/THREONINE-PROTEIN KINASE IAL-RELATED |
Paelopatides42796 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides42797 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides42798 | AGAP005574-PA |
Paelopatides42799 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides42800 | PROTEIN CBG26694 |
Paelopatides42801 | PROTEIN CBG26694 |
Paelopatides42802 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42803 | |
Paelopatides42804 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42805 | TRANSPOSON |
Paelopatides42806 | |
Paelopatides42807 | CRUMBS FAMILY MEMBER |
Paelopatides42808 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Paelopatides42809 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42810 | |
Paelopatides42811 | |
Paelopatides42812 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
Paelopatides42813 | RETROTRANSPOSON |
Paelopatides42814 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides42815 | |
Paelopatides42817 | LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN |