The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides43023 | RETROTRANSPOSON |
Paelopatides43024 | |
Paelopatides43025 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides43026 | SOLUTE CARRIER FAMILY 5 |
Paelopatides43027 | SOLUTE CARRIER FAMILY 5 |
Paelopatides43028 | IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB |
Paelopatides43029 | |
Paelopatides43030 | |
Paelopatides43031 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides43032 | 2-HACID_DH_C DOMAIN-CONTAINING PROTEIN |
Paelopatides43033 | FYVE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides43034 | |
Paelopatides43035 | |
Paelopatides43036 | FYVE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides43037 | TALIN |
Paelopatides43038 | TALIN |
Paelopatides43039 | SUGAR KINASE |
Paelopatides43040 | |
Paelopatides43041 | MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED |
Paelopatides43042 | |
Paelopatides43043 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
Paelopatides43045 | BETA1,3-GALACTOSYLTRANSFERASE |
Paelopatides43046 | CHONDROITIN SYNTHASE |
Paelopatides43047 | |
Paelopatides43048 | |
Paelopatides43049 | ANOCTAMIN |
Paelopatides43050 | N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE |
Paelopatides43051 | ANOCTAMIN |
Paelopatides43052 | UNCHARACTERIZED |
Paelopatides43053 | |
Paelopatides43054 | OPSIN |
Paelopatides43055 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides43056 | CDC37-RELATED |
Paelopatides43060 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 |
Paelopatides43061 | DISCS LARGE |
Paelopatides43062 | DNA REPAIR PROTEIN XRCC3 |
Paelopatides43063 | RAB3-GAP REGULATORY DOMAIN |
Paelopatides43064 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43065 | RAB3-GAP REGULATORY DOMAIN |
Paelopatides43066 | INTEGRAL MEMBRANE PROTEIN GPR137 |
Paelopatides43067 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43069 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides43070 | |
Paelopatides43071 | |
Paelopatides43072 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides43073 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides43074 | |
Paelopatides43075 | SIMILAR TO HYPOTHETICAL PROTEIN FLJ20508 |
Paelopatides43076 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides43077 |