The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides43181 | |
| Paelopatides43182 | |
| Paelopatides43183 | GAG-RELATED PROTEIN |
| Paelopatides43184 | ADP-RIBOSYL CYCLASE |
| Paelopatides43185 | WSCD FAMILY MEMBER CG9164 |
| Paelopatides43186 | |
| Paelopatides43187 | - |
| Paelopatides43188 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides43189 | |
| Paelopatides43190 | PROTEIN CBG26694 |
| Paelopatides43191 | |
| Paelopatides43192 | PROTEIN CBG26694 |
| Paelopatides43193 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides43194 | |
| Paelopatides43195 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43196 | FI04643P-RELATED |
| Paelopatides43197 | 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)] |
| Paelopatides43199 | PROTEIN CBG26694 |
| Paelopatides43200 | |
| Paelopatides43201 | |
| Paelopatides43202 | UNCHARACTERIZED |
| Paelopatides43203 | PROTEIN FLATTOP |
| Paelopatides43204 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
| Paelopatides43205 | HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5 |
| Paelopatides43206 | |
| Paelopatides43207 | CASEIN KINASE-RELATED |
| Paelopatides43208 | UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEIN |
| Paelopatides43209 | PRE-MRNA SPLICING FACTOR |
| Paelopatides43210 | PRE-MRNA SPLICING FACTOR |
| Paelopatides43211 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| Paelopatides43212 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
| Paelopatides43213 | |
| Paelopatides43214 | UBIQUITIN LIGASE E3 ALPHA-RELATED |
| Paelopatides43215 | UBIQUITIN LIGASE E3 ALPHA-RELATED |
| Paelopatides43216 | |
| Paelopatides43217 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| Paelopatides43218 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| Paelopatides43219 | RADICAL SAM PROTEINS |
| Paelopatides43220 | RADICAL SAM PROTEINS |
| Paelopatides43221 | |
| Paelopatides43222 | |
| Paelopatides43223 | |
| Paelopatides43224 | ENDONUCLEASE-RELATED |
| Paelopatides43225 | |
| Paelopatides43226 | NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED |
| Paelopatides43227 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43228 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 300 |
| Paelopatides43231 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
| Paelopatides43232 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43233 | MYOTROPHIN |
