The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides43708 | N-LYSINE METHYLTRANSFERASE KMT5A |
Paelopatides43709 | |
Paelopatides43710 | |
Paelopatides43711 | TRANSPOSASE, PUTATIVE-RELATED |
Paelopatides43712 | |
Paelopatides43713 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
Paelopatides43714 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
Paelopatides43715 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
Paelopatides43716 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43717 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN |
Paelopatides43718 | |
Paelopatides43719 | PESCADILLO - RELATED |
Paelopatides43720 | SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2 |
Paelopatides43721 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43722 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
Paelopatides43723 | HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED |
Paelopatides43724 | CHAPERONIN |
Paelopatides43725 | |
Paelopatides43726 | |
Paelopatides43727 | SET AND MYND DOMAIN-CONTAINING PROTEIN 4 |
Paelopatides43728 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides43729 | ENDONUCLEASE-RELATED |
Paelopatides43730 | LD24721P |
Paelopatides43731 | RAPSYN-RELATED |
Paelopatides43732 | RAPSYN-RELATED |
Paelopatides43733 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides43734 | PSEUDOURIDINE SYNTHASE-RELATED |
Paelopatides43735 | ALPHA-2,8-SIALYLTRANSFERASE |
Paelopatides43736 | |
Paelopatides43737 | |
Paelopatides43738 | |
Paelopatides43739 | ACROSIN-RELATED |
Paelopatides43740 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Paelopatides43741 | |
Paelopatides43742 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides43743 | EXPRESSED PROTEIN |
Paelopatides43744 | |
Paelopatides43745 | |
Paelopatides43746 | SULFOTRANSFERASE SULT |
Paelopatides43747 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides43748 | COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER |
Paelopatides43749 | |
Paelopatides43750 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43751 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
Paelopatides43752 | ZINC FINGER PROTEIN 200 |
Paelopatides43753 | |
Paelopatides43754 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides43755 | |
Paelopatides43756 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
Paelopatides43757 |