The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides43758 | PHD/F-BOX CONTAINING PROTEIN |
Paelopatides43759 | BONUS, ISOFORM C-RELATED |
Paelopatides43760 | BETA1,3-GALACTOSYLTRANSFERASE |
Paelopatides43761 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
Paelopatides43762 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
Paelopatides43763 | |
Paelopatides43764 | RAS-RELATED PROTEIN RAB |
Paelopatides43765 | UNCHARACTERIZED |
Paelopatides43766 | UNCHARACTERIZED |
Paelopatides43767 | |
Paelopatides43768 | 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)] |
Paelopatides43769 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides43770 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Paelopatides43771 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43772 | |
Paelopatides43773 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides43774 | ZINC FINGER PROTEIN |
Paelopatides43775 | PR DOMAIN ZINC FINGER PROTEIN |
Paelopatides43776 | |
Paelopatides43777 | GOLGI INTEGRAL MEMBRANE PROTEIN 4 |
Paelopatides43778 | |
Paelopatides43779 | |
Paelopatides43780 | |
Paelopatides43781 | PROTEIN CBG26694 |
Paelopatides43782 | BUCENTAUR RELATED |
Paelopatides43783 | |
Paelopatides43784 | |
Paelopatides43785 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43786 | |
Paelopatides43787 | VESICULAR-FUSION PROTEIN NSF |
Paelopatides43788 | PROTEIN CBG26694 |
Paelopatides43789 | 60S RIBOSOMAL PROTEIN L13 |
Paelopatides43790 | |
Paelopatides43791 | LEUCYL-TRNA SYNTHETASE |
Paelopatides43792 | ZINC FINGER PROTEIN |
Paelopatides43793 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43794 | |
Paelopatides43795 | PROPERDIN |
Paelopatides43796 | |
Paelopatides43797 | PROTEIN CBG26694 |
Paelopatides43798 | PROTEIN CBG26694 |
Paelopatides43799 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides43800 | PUTATIVE-RELATED |
Paelopatides43801 | |
Paelopatides43802 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides43803 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides43804 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43805 | PROTEIN CBG20422 |
Paelopatides43806 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides43807 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |