About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43860MUCIN 4-RELATED
Paelopatides43861
Paelopatides43862ASPARTYL-TRNA SYNTHETASE
Paelopatides4386352 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides43864REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43865REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43866EXODEOXYRIBONUCLEASE III
Paelopatides43867LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
Paelopatides43868ENDONUCLEASE-RELATED
Paelopatides43869POL PROTEIN
Paelopatides43870
Paelopatides43871G-PROTEIN COUPLED RECEPTOR
Paelopatides43872ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides43873ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides43874PROTEIN CBG26694
Paelopatides43875HISTONE H4
Paelopatides43876HISTONE H3
Paelopatides43877HISTONE H2A
Paelopatides43878
Paelopatides43879HISTONE H2A
Paelopatides43880HISTONE H2B
Paelopatides43881HISTONE H4
Paelopatides43882HISTONE H3
Paelopatides43883HISTONE H2A
Paelopatides43884
Paelopatides43885
Paelopatides43886
Paelopatides43887HISTONE H2B
Paelopatides43888HISTONE H4
Paelopatides43889HISTONE H3
Paelopatides43890HISTONE H2A
Paelopatides43891HISTONE H2B
Paelopatides43892RETROTRANSPOSON
Paelopatides43893PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43894PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43895ZINC FINGER PROTEIN
Paelopatides43896CARBOHYDRATE SULFOTRANSFERASE
Paelopatides43897CARBOHYDRATE SULFOTRANSFERASE
Paelopatides43898SYNAPTIC VESICLE GLYCOPROTEIN 2
Paelopatides43899HYR DOMAIN-CONTAINING PROTEIN
Paelopatides43900
Paelopatides43901INNER MEMBRANE TRANSPORTER YGJI-RELATED
Paelopatides43902BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
Paelopatides43903FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides43904MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Paelopatides43905GLYCOPROTEIN HORMONE ALPHA-2
Paelopatides43906YBAK DOMAIN-CONTAINING PROTEIN
Paelopatides43907PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides43908PROTEIN CBG26694
Paelopatides43909
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