The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides43658 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43659 | SARCOSINE DEHYDROGENASE-RELATED |
| Paelopatides43660 | T-BOX PROTEIN-RELATED |
| Paelopatides43661 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| Paelopatides43662 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides43663 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| Paelopatides43664 | |
| Paelopatides43665 | CYSTEINE-RICH HYDROPHOBIC DOMAIN PROTEIN BRAIN X-LINKED PROTEIN |
| Paelopatides43666 | GLYCOPROTEIN HORMONE RECEPTOR |
| Paelopatides43667 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43668 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43669 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43670 | |
| Paelopatides43671 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43672 | |
| Paelopatides43673 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| Paelopatides43674 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| Paelopatides43675 | |
| Paelopatides43676 | BONUS, ISOFORM C-RELATED |
| Paelopatides43677 | BONUS, ISOFORM C-RELATED |
| Paelopatides43678 | |
| Paelopatides43679 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides43680 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43681 | FIBRINOGEN ALPHA CHAIN |
| Paelopatides43682 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43683 | |
| Paelopatides43684 | SI:CH211-262H13.3-RELATED-RELATED |
| Paelopatides43685 | TRANSPOSON |
| Paelopatides43686 | EXPRESSED PROTEIN |
| Paelopatides43687 | OPSIN |
| Paelopatides43688 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides43689 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides43690 | MONOCARBOXYLATE TRANSPORTER |
| Paelopatides43691 | |
| Paelopatides43692 | GNAT FAMILY N-ACETYLTRANSFERASE |
| Paelopatides43693 | PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 |
| Paelopatides43694 | INHIBITOR OF APOPTOSIS |
| Paelopatides43695 | ORGANIC ANION TRANSPORTER |
| Paelopatides43696 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides43697 | NG5 |
| Paelopatides43698 | |
| Paelopatides43699 | DUF614 FAMILY PROTEIN-RELATED |
| Paelopatides43700 | - |
| Paelopatides43701 | BCS1 AAA-TYPE ATPASE |
| Paelopatides43702 | |
| Paelopatides43703 | GLYCOSYLTRANSFERASE |
| Paelopatides43704 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43705 | NITROGEN METABOLITE REPRESSION PROTEIN NMRA FAMILY MEMBER |
| Paelopatides43706 | PROSTAGLANDIN REDUCTASE |
| Paelopatides43707 |
