The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides43605 | ENDONUCLEASE |
| Paelopatides43606 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43607 | PROTEIN, PUTATIVE-RELATED |
| Paelopatides43608 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43609 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides43610 | |
| Paelopatides43611 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides43612 | PROTEIN CBG26694 |
| Paelopatides43613 | PROTEIN CBG26694 |
| Paelopatides43614 | TUMOR ENDOTHELIAL MARKER 7 RELATED |
| Paelopatides43615 | |
| Paelopatides43616 | MULTICOPPER OXIDASE-RELATED |
| Paelopatides43617 | |
| Paelopatides43618 | LANC-LIKE PROTEIN |
| Paelopatides43619 | N-MYRISTOYL TRANSFERASE |
| Paelopatides43620 | UNCHARACTERIZED |
| Paelopatides43621 | DEPHOSPHO-COA KINASE-RELATED |
| Paelopatides43622 | 3-HYDROXYACYL-COA DEHYROGENASE |
| Paelopatides43623 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| Paelopatides43624 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| Paelopatides43625 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| Paelopatides43626 | ACYL-COA-BINDING PROTEIN, ACBP |
| Paelopatides43627 | |
| Paelopatides43628 | NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] |
| Paelopatides43630 | GLYCOGENIN SUBFAMILY MEMBER |
| Paelopatides43631 | |
| Paelopatides43632 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43633 | |
| Paelopatides43634 | UNCHARACTERIZED |
| Paelopatides43637 | TEKTIN |
| Paelopatides43638 | |
| Paelopatides43639 | |
| Paelopatides43640 | |
| Paelopatides43641 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides43642 | |
| Paelopatides43643 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| Paelopatides43644 | 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE |
| Paelopatides43645 | PROTEIN CBG26694 |
| Paelopatides43646 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides43647 | 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE |
| Paelopatides43648 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides43649 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides43650 | |
| Paelopatides43651 | |
| Paelopatides43652 | EXPRESSED PROTEIN |
| Paelopatides43653 | |
| Paelopatides43654 | |
| Paelopatides43655 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides43656 | NECTIN-RELATED |
| Paelopatides43657 |
