About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45006
Paelopatides45007PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides45008ADENYLOSUCCINATE SYNTHETASE
Paelopatides45009SCAVENGER RECEPTOR CLASS F
Paelopatides45010BONUS, ISOFORM C-RELATED
Paelopatides45011HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides45012
Paelopatides45013ENDOPLASMIC RETICULUM MEMBRANE-ASSOCIATED RNA DEGRADATION PROTEIN
Paelopatides45014ZGC:153157
Paelopatides45015MULTIPLE PDZ DOMAIN PROTEIN
Paelopatides45016
Paelopatides45017SI:CH211-196P9.1-RELATED
Paelopatides45018CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS
Paelopatides45019CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS
Paelopatides45020PROTEIN CBG21859
Paelopatides45021MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides45022THIOPURINE S-METHYLTRANSFERASE
Paelopatides45023
Paelopatides45024
Paelopatides45025POL PROTEIN
Paelopatides45026PROTEIN CBG26694
Paelopatides45027SLR5058 PROTEIN
Paelopatides45028FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides45029CYSTEINE PROTEASE ATG4
Paelopatides45030FRIZZLED
Paelopatides45031ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45032
Paelopatides45033UNCHARACTERIZED
Paelopatides45034UNCHARACTERIZED
Paelopatides45035EXOCYST COMPLEX COMPONENT SEC6-RELATED
Paelopatides45036GOLGI-ASSOCIATED KINASE 1B-RELATED
Paelopatides45037GOLGI-ASSOCIATED KINASE 1B-RELATED
Paelopatides45038HYR DOMAIN-CONTAINING PROTEIN
Paelopatides45039
Paelopatides45040SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED
Paelopatides45041SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED
Paelopatides45042
Paelopatides45043TRANSPOSON
Paelopatides45044SMITH-MAGENIS SYNDROME REGION GENE 8 PROTEIN
Paelopatides45045
Paelopatides45046REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45047PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides45048LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides45049SCAVENGER RECEPTOR DOMAIN-CONTAINING
Paelopatides45050PROTEIN CBG26694
Paelopatides45051
Paelopatides45052
Paelopatides45053LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides45054CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides45055PIKACHURIN-LIKE PROTEIN
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