The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides45260 | |
Paelopatides45261 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45262 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45263 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides45266 | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER |
Paelopatides45267 | NETRIN RECEPTOR UNC5 |
Paelopatides45268 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
Paelopatides45269 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
Paelopatides45270 | |
Paelopatides45271 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
Paelopatides45272 | |
Paelopatides45273 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides45274 | AGL056WP |
Paelopatides45275 | TYROSINE-PROTEIN KINASE |
Paelopatides45276 | |
Paelopatides45277 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides45278 | PROTEIN CBG26694 |
Paelopatides45279 | |
Paelopatides45280 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides45281 | |
Paelopatides45282 | |
Paelopatides45283 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides45284 | |
Paelopatides45285 | UBIQUITIN-CONJUGATING ENZYME E2 |
Paelopatides45286 | DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN |
Paelopatides45287 | ETS |
Paelopatides45288 | |
Paelopatides45289 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides45290 | MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 |
Paelopatides45291 | PORCUPINE |
Paelopatides45292 | PROTEIN CBG26694 |
Paelopatides45293 | |
Paelopatides45294 | |
Paelopatides45295 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45296 | METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE |
Paelopatides45297 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides45298 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides45299 | PROTEIN RCC2 |
Paelopatides45300 | FUMARATE HYDRATASE-RELATED |
Paelopatides45301 | |
Paelopatides45302 | |
Paelopatides45303 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides45304 | |
Paelopatides45305 | |
Paelopatides45306 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides45308 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
Paelopatides45309 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
Paelopatides45310 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
Paelopatides45311 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
Paelopatides45312 | ALPHA-2,8-SIALYLTRANSFERASE |