The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides45209 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45210 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45211 | |
| Paelopatides45212 | UNCHARACTERIZED |
| Paelopatides45213 | UREASE ACCESSORY PROTEIN G |
| Paelopatides45214 | UREASE |
| Paelopatides45215 | UREASE |
| Paelopatides45217 | |
| Paelopatides45218 | LP07818P1 |
| Paelopatides45219 | RNA RECOGNITION MOTIF-CONTAINING |
| Paelopatides45220 | TYROSINE-PROTEIN KINASE |
| Paelopatides45221 | |
| Paelopatides45222 | |
| Paelopatides45223 | |
| Paelopatides45224 | |
| Paelopatides45225 | |
| Paelopatides45226 | |
| Paelopatides45227 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45228 | CORTACTIN AND DREBRIN |
| Paelopatides45229 | |
| Paelopatides45230 | - |
| Paelopatides45231 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides45232 | |
| Paelopatides45233 | POL PROTEIN |
| Paelopatides45234 | ENDONUCLEASE-RELATED |
| Paelopatides45235 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45236 | COMM DOMAIN-CONTAINING PROTEIN 3 |
| Paelopatides45237 | REVERSE TRANSCRIPTASES |
| Paelopatides45238 | GTP-BINDING |
| Paelopatides45239 | |
| Paelopatides45240 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45241 | GTP-BINDING |
| Paelopatides45242 | GTP-BINDING |
| Paelopatides45243 | |
| Paelopatides45244 | HEMOPEXIN DOMAIN-CONTAINING PROTEIN |
| Paelopatides45245 | |
| Paelopatides45246 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45247 | |
| Paelopatides45248 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides45249 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45250 | N-LYSINE METHYLTRANSFERASE KMT5A |
| Paelopatides45251 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides45252 | TNF RECEPTOR ASSOCIATED FACTOR |
| Paelopatides45253 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45254 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
| Paelopatides45255 | |
| Paelopatides45256 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45257 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| Paelopatides45258 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides45259 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
