About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45365
Paelopatides45366AMINOMETHYLTRANSFERASE
Paelopatides45367CARBOXYLIC ESTER HYDROLASE
Paelopatides45368CARBOXYLIC ESTER HYDROLASE
Paelopatides45369ACROSIN-RELATED
Paelopatides45370ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45371EXPRESSED PROTEIN
Paelopatides45372L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides45373REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45374HMG-BOX TRANSCRIPTION FACTOR BBX
Paelopatides45375HMG-BOX TRANSCRIPTION FACTOR BBX
Paelopatides45376
Paelopatides45377
Paelopatides45378CELL SURFACE GLYCOPROTEIN MUC18-RELATED
Paelopatides45379NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides45380NXPE FAMILY MEMBER
Paelopatides45381
Paelopatides45382N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE
Paelopatides45383
Paelopatides45384INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides45385
Paelopatides45386NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED
Paelopatides45387UNCHARACTERIZED
Paelopatides45388
Paelopatides45389
Paelopatides45390SI:CH211-196P9.1-RELATED
Paelopatides45391L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides45392GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides45393VINCULIN
Paelopatides45394
Paelopatides45395
Paelopatides45396INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45397UNCHARACTERIZED
Paelopatides45398
Paelopatides45399TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides45400
Paelopatides45401PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides45402ARGININE OR CREATINE KINASE
Paelopatides45403ENDONUCLEASE
Paelopatides45404REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides4540526S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9
Paelopatides45406
Paelopatides45407FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45408FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45409FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45410PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides45411MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
Paelopatides45412ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides45413TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides45414REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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