The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides45365 | |
Paelopatides45366 | AMINOMETHYLTRANSFERASE |
Paelopatides45367 | CARBOXYLIC ESTER HYDROLASE |
Paelopatides45368 | CARBOXYLIC ESTER HYDROLASE |
Paelopatides45369 | ACROSIN-RELATED |
Paelopatides45370 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45371 | EXPRESSED PROTEIN |
Paelopatides45372 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides45373 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45374 | HMG-BOX TRANSCRIPTION FACTOR BBX |
Paelopatides45375 | HMG-BOX TRANSCRIPTION FACTOR BBX |
Paelopatides45376 | |
Paelopatides45377 | |
Paelopatides45378 | CELL SURFACE GLYCOPROTEIN MUC18-RELATED |
Paelopatides45379 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides45380 | NXPE FAMILY MEMBER |
Paelopatides45381 | |
Paelopatides45382 | N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE |
Paelopatides45383 | |
Paelopatides45384 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides45385 | |
Paelopatides45386 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
Paelopatides45387 | UNCHARACTERIZED |
Paelopatides45388 | |
Paelopatides45389 | |
Paelopatides45390 | SI:CH211-196P9.1-RELATED |
Paelopatides45391 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides45392 | GLYCOPROTEIN HORMONE RECEPTOR |
Paelopatides45393 | VINCULIN |
Paelopatides45394 | |
Paelopatides45395 | |
Paelopatides45396 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides45397 | UNCHARACTERIZED |
Paelopatides45398 | |
Paelopatides45399 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
Paelopatides45400 | |
Paelopatides45401 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45402 | ARGININE OR CREATINE KINASE |
Paelopatides45403 | ENDONUCLEASE |
Paelopatides45404 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45405 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 |
Paelopatides45406 | |
Paelopatides45407 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides45408 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides45409 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides45410 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides45411 | MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN |
Paelopatides45412 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides45413 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides45414 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |