About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45517
Paelopatides45518
Paelopatides45519SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Paelopatides45521PROTEIN, PUTATIVE-RELATED
Paelopatides45522SI:CH211-262H13.3-RELATED-RELATED
Paelopatides45523
Paelopatides45524
Paelopatides45525TRANSPOSON
Paelopatides45526
Paelopatides45527ZGC:195170
Paelopatides45528
Paelopatides45529
Paelopatides45530
Paelopatides45531ACID AMIDASE
Paelopatides45532MATRIX METALLOPROTEINASE
Paelopatides45533BONUS, ISOFORM C-RELATED
Paelopatides45534BONUS, ISOFORM C-RELATED
Paelopatides45535
Paelopatides45537
Paelopatides45542ENZYMATIC POLYPROTEIN-RELATED
Paelopatides45543PROTEIN ARGININE N-METHYLTRANSFERASE
Paelopatides45544
Paelopatides45545NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides45546PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides45547
Paelopatides45548REVERSE TRANSCRIPTASES
Paelopatides45549PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides45550REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45551REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45552PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides45553CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides45554
Paelopatides45555NOTCH LIGAND FAMILY MEMBER
Paelopatides45556PROTEIN CBG26694
Paelopatides45557FI04643P-RELATED
Paelopatides45558ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45559ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45560BONUS, ISOFORM C-RELATED
Paelopatides45561RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides45563DNA REPAIR/RNA PROCESSING CPSF FAMILY
Paelopatides45564PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides45565POL PROTEIN
Paelopatides45566
Paelopatides45567CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45568CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Paelopatides45569ALPHA-TECTORIN-RELATED
Paelopatides45570IP13529P
Paelopatides45571
Paelopatides45572GAMMA GLUTAMYL TRANSPEPTIDASE
Paelopatides45573PHOSPHOENOLPYRUVATE CARBOXYKINASE
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