The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides45574 | N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED |
Paelopatides45575 | UPF0041 BRAIN PROTEIN 44-RELATED |
Paelopatides45576 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
Paelopatides45577 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
Paelopatides45578 | |
Paelopatides45579 | GLUTATHIONE S-TRANSFERASE |
Paelopatides45580 | GLUTATHIONE S-TRANSFERASE |
Paelopatides45581 | |
Paelopatides45582 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides45583 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides45584 | |
Paelopatides45585 | |
Paelopatides45586 | RNA BINDING PROTEIN |
Paelopatides45587 | RNA BINDING PROTEIN |
Paelopatides45588 | SERINE/THREONINE-PROTEIN KINASE |
Paelopatides45589 | |
Paelopatides45590 | PROTEIN CBG26694 |
Paelopatides45591 | MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED |
Paelopatides45592 | MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED |
Paelopatides45593 | RETROTRANSPOSON |
Paelopatides45594 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides45595 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides45596 | ANKYRIN REPEAT PROTEIN |
Paelopatides45597 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides45598 | |
Paelopatides45599 | HEAT SHOCK PROTEIN 70KDA |
Paelopatides45600 | HEAT SHOCK PROTEIN 70KDA |
Paelopatides45601 | |
Paelopatides45602 | FI04643P-RELATED |
Paelopatides45603 | |
Paelopatides45604 | METABOTROPIC GLUTAMATE RECEPTOR |
Paelopatides45605 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides45606 | PROTEIN CBG26694 |
Paelopatides45609 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45610 | |
Paelopatides45611 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45612 | - |
Paelopatides45613 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides45614 | |
Paelopatides45615 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides45616 | |
Paelopatides45617 | SARM1 |
Paelopatides45618 | RAS-RELATED PROTEIN RAB |
Paelopatides45619 | CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1 |
Paelopatides45620 | PHD/F-BOX CONTAINING PROTEIN |
Paelopatides45621 | MORN REPEAT-CONTAINING PROTEIN 3 |
Paelopatides45622 | T COMPLEX PROTEIN 10 |
Paelopatides45623 | T COMPLEX PROTEIN 10 |
Paelopatides45624 | |
Paelopatides45625 |