About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45893CYCLIN
Paelopatides45894REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45895
Paelopatides45896
Paelopatides45897
Paelopatides45898
Paelopatides45900
Paelopatides45901
Paelopatides45902CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45903THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9
Paelopatides45904
Paelopatides45905UBX DOMAIN CONTAINING PROTEIN
Paelopatides45906
Paelopatides45907ENDONUCLEASE-RELATED
Paelopatides45908WD REPEAT-CONTAINING PROTEIN 48
Paelopatides45909
Paelopatides45910-
Paelopatides45911PROTEIN CBG26694
Paelopatides45912SYNDECAN
Paelopatides45913FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45914POL PROTEIN
Paelopatides45915CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides45916TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides45917FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45918
Paelopatides45919PROTEIN CBG26694
Paelopatides45920
Paelopatides45921
Paelopatides45922KINETOCHORE SCAFFOLD 1
Paelopatides45923TESTIS-EXPRESSED PROTEIN 43
Paelopatides4592430S RIBOSOMAL PROTEIN S12 FAMILY MEMBER
Paelopatides45925
Paelopatides45926
Paelopatides45927PROTEIN FAM181B
Paelopatides45928
Paelopatides45929
Paelopatides45930PROTEASE U48 CAAX PRENYL PROTEASE RCE1
Paelopatides45931TRANSMEMBRANE PROTEIN
Paelopatides45932ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45933REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides459343-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE
Paelopatides45935SELENOPROTEIN W
Paelopatides45936
Paelopatides45937RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides45938UNCHARACTERIZED
Paelopatides45939FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45940SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45941ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER
Paelopatides45942-
Paelopatides45943METALLOPROTEASE M41 FTSH
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