The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides46205 | |
| Paelopatides46206 | |
| Paelopatides46207 | |
| Paelopatides46208 | TRANSMEMBRANE PROTEIN |
| Paelopatides46209 | |
| Paelopatides46210 | HYR DOMAIN-CONTAINING PROTEIN |
| Paelopatides46211 | HYR DOMAIN-CONTAINING PROTEIN |
| Paelopatides46212 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46213 | SLR5058 PROTEIN |
| Paelopatides46214 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides46215 | |
| Paelopatides46216 | PROTEIN CBG26694 |
| Paelopatides46217 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides46218 | |
| Paelopatides46219 | UBIQUITIN THIOESTERASE |
| Paelopatides46220 | |
| Paelopatides46221 | |
| Paelopatides46222 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides46223 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides46224 | |
| Paelopatides46225 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides46226 | CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEIN |
| Paelopatides46228 | |
| Paelopatides46229 | |
| Paelopatides46230 | ENDONUCLEASE-RELATED |
| Paelopatides46231 | |
| Paelopatides46232 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides46235 | RETROTRANSPOSON |
| Paelopatides46236 | RETROTRANSPOSON |
| Paelopatides46237 | |
| Paelopatides46238 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides46239 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E |
| Paelopatides46240 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| Paelopatides46241 | PROTEIN CBG26694 |
| Paelopatides46242 | |
| Paelopatides46243 | |
| Paelopatides46244 | REVERSE TRANSCRIPTASE |
| Paelopatides46245 | CYTOCHROME P450 508A4-RELATED |
| Paelopatides46246 | MEIOTIC RECOMBINATION PROTEIN SPO11 |
| Paelopatides46247 | PROTEIN CBG26694 |
| Paelopatides46248 | PROTEIN CBG26694 |
| Paelopatides46249 | |
| Paelopatides46250 | |
| Paelopatides46251 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46252 | UNC-13-4A, ISOFORM B |
| Paelopatides46253 | |
| Paelopatides46254 | PROTEIN CBG26694 |
| Paelopatides46255 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| Paelopatides46256 | |
| Paelopatides46257 |
